Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq123 107 2e-18
seq12 104 2e-17
>seq123
Length=3649919
Score = 107 bits (118), Expect = 2e-18
Identities = 105/134 (78%), Gaps = 1/134 (1%)
Strand=Plus/Minus
Query 4562 ATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621
|| || |||| | ||||| || || ||||| || ||||| || | ||| |||||||| ||
Sbjct 2429732 ATTCATACCT-CATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCC 2429674
Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681
||| || || |||||||| || | ||||| || ||||||||||| || ||||| || ||
Sbjct 2429673 TCTTTTCTTCAGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGC 2429614
Query 4682 GGCAAACGCTACTA 4695
||||| |||||||
Sbjct 2429613 TGCAAAAGCTACTA 2429600
>seq12
Length=3827242
Score = 104 bits (114), Expect = 2e-17
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || || || || | ||| ||||| | || || || ||
Sbjct 3384537 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 3384478
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
|||||||||||||| ||||| || || |||||||| |||||||| || || ||||| ||
Sbjct 3384477 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 3384418
Query 4692 AC 4693
||
Sbjct 3384417 AC 3384416
Score = 100 bits (110), Expect = 2e-16
Identities = 101/130 (78%), Gaps = 1/130 (1%)
Strand=Plus/Minus
Query 4922 AAATCTTTCT-ACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
||| | |||| || | |||||| ||||| || || ||||||||||||||||| |||| ||
Sbjct 3379804 AAAGCCTTCTCACCAGGTTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAA 3379745
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||||| |||||||| | ||| || | || || || |||||||| || | || || |
Sbjct 3379744 CATGAGAGATAAAGTATTTTTCATCTGCTTTCAGCTTGTTCCAGTGAGGAAGGTCCTTTG 3379685
Query 5041 TTAAATCAAC 5050
||||||||
Sbjct 3379684 ACAAATCAAC 3379675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427019085037379
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |