Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05] 5,863 sequences; 1,174,811,715 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq123 107 3e-18 seq12 102 1e-16 seq431 93.3 6e-14 >seq123 Length=3649919 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 ||||||||||| |||| ||| || ||||| ||||| |||||||||| ||| | || || Sbjct 2429723 TCATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 2429664 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||||| || | || ||||| ||||||||||| || ||||| || || || || || Sbjct 2429663 AGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGCT 2429604 Query 46774 ACAAGTCTCTCTCC 46787 || | | |||||| Sbjct 2429603 ACTACACGCTCTCC 2429590 Score = 95.1 bits (104), Expect = 2e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 ||||||||||||||| | || ||||||||||| | ||||| || ||||| || |||||| Sbjct 2431001 GACATAACTCCCATTCTCTGATATTCACCTACTCTCTTCTCAAAGAAATTGGTCTTGCCT 2430942 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATT 46418 |||| || || |||||||| || ||||| ||||| Sbjct 2430941 TCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 2430907 >seq12 Length=3827242 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || || || || || |||||||| || || | || || Sbjct 3384537 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 3384478 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 |||||||||||||| || || || || |||||||| |||||||| || || || || || Sbjct 3384477 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 3384418 Query 46774 ACAAGTCTCTCTCC 46787 || | |||||| || Sbjct 3384417 ACCACTCTCTCACC 3384404 >seq431 Length=331394 Score = 93.3 bits (102), Expect = 6e-14 Identities = 112/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 76597 AACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACG 76656 ||| || ||||| ||||||||||| ||||| || |||| ||| || |||| || || | Sbjct 63773 AACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAAAAAAGGTCTCTGGCTCGCTG 63832 Query 76657 TTCTTCATTTCCTGTATTCTT-TTTAAGATCTAGGAACTCCATAATATCAGAATGCCATG 76715 ||||| || || || ||||| |||||| || || ||||| | ||||| ||||||||| Sbjct 63833 CTCTTCTTTCCCAGTGTTCTTCTTTAAG-TCAAGAAACTCAAAGATATCCAAATGCCATG 63891 Query 76716 GTTCTAGATATATCGCCATAACACCCGGTC 76745 | || || || || || | | | || |||| Sbjct 63892 GCTCCAGGTAGATGGCAAAAGCCCCAGGTC 63921 Score = 89.7 bits (98), Expect = 7e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || |||||||| || || || || || ||||| || ||||| ||||||| || |||||| Sbjct 66031 GTACCTGCATTGAATAACGTGGGGGAGGCATGGGTAAACCACCTTTCAGAGAGAAGATTG 66090 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || |||||||| | || || || || || || || || || | || | ||||||| Sbjct 66091 TAGGTTTCAATTGCAGCATCAATGTCATTTTTGTGGATCCCCACCGATACTCTCATCAAC 66150 Query 77114 ATATGCTGAGGTCGTTC 77130 ||||||||||| || || Sbjct 66151 ATATGCTGAGGACGCTC 66167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712882150820160