Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq780 118 2e-21
>seq780
Length=11850152
Score = 118 bits (130), Expect = 2e-21
Identities = 162/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || || || || ||||||||||| || | | ||
Sbjct 4730733 CCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGT 4730792
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||||||| || || || |||||||| |||| ||||||||| | | || ||
Sbjct 4730793 GCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGAATGCC 4730852
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
|||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 4730853 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTC 4730909
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||| || || |||||||| |||| ||||||
Sbjct 4730910 AAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 4730954
Score = 116 bits (128), Expect = 9e-21
Identities = 165/231 (71%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| |||||||| || || || || || ||||||||||| || | | ||
Sbjct 4731189 CCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGT 4731248
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||||||| || || || || ||||| |||| ||||||||| | | || ||
Sbjct 4731249 GCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCC 4731308
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
|||||| || || || || || ||| |||| | | |||| ||| ||| || ||
Sbjct 4731309 TTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTC 4731365
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
||| || || || ||||| || || |||||||| |||| |||||| | |||
Sbjct 4731366 AAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATGTCACC 4731416
Score = 109 bits (120), Expect = 1e-18
Identities = 154/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| || || || ||||| ||||||||||| || | | || | |||||||
Sbjct 4730971 AGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4731030
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||| ||||||||| | | || |||||||| ||
Sbjct 4731031 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 4731090
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| || ||||| || ||
Sbjct 4731091 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATG 4731147
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | |||||||| |||| ||||||
Sbjct 4731148 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 4731182
Score = 105 bits (116), Expect = 2e-17
Identities = 155/218 (71%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| |||||||| || || || || || ||||||||||| || | | || | |||||||
Sbjct 4731427 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 4731486
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||| ||||||||| | | || |||||||| ||
Sbjct 4731487 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 4731546
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || ||| |||| | | |||| ||| ||| || ||||| || ||
Sbjct 4731547 TGGATCTTGGCCTTCACATTCTCAATGGTGTC---ACTGGGCTCGACCTCAAGGGTGATG 4731603
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| || | |||||||| |||| |||||| ||
Sbjct 4731604 GTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATGTT 4731641
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153734125342073
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |