Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Falco_20cherrug_20[refseq_20GCF_5F000337975.1_202013-02-05]
5,863 sequences; 1,174,811,715 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq515 129 4e-25
seq780 127 1e-24
>seq515
Length=1665176
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 30407 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 30348
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 30347 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 30288
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | |||| | |||||||| || |
Sbjct 30287 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCT 30229
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 30228 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30176
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 30635 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 30576
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 30575 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 30516
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | |||| | |||||||| || |
Sbjct 30515 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCT 30457
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 30456 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30404
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 30863 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 30804
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 30803 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 30744
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | |||| | |||||||| || |
Sbjct 30743 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCT 30685
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 30684 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30632
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 31091 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 31032
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 31031 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 30972
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | |||| | |||||||| || |
Sbjct 30971 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCT 30913
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 30912 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 30860
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 31319 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 31260
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 31259 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 31200
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | |||| | |||||||| || |
Sbjct 31199 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCT 31141
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 31140 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31088
Score = 129 bits (142), Expect = 4e-25
Identities = 170/233 (73%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 31547 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 31488
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 31487 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 31428
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | |||||||| ||| ||||| ||| | |||| | |||||||| || |
Sbjct 31427 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCT 31369
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 31368 CAACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31316
Score = 122 bits (134), Expect = 6e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || ||| || || || ||| ||||| ||||||||||| || | |
Sbjct 31771 CCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAG 31712
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || |||||||| | | |||||||| | ||
Sbjct 31711 AGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGGGGA 31652
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| |||||||| ||| ||||| ||| | |||| | |||||||| || || ||
Sbjct 31651 ATGCCTTCCTTGTCCTGGATCTTGGCCTTTAC-GTTCTCAATGGTGTCACTGGGCTCAAC 31593
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 31592 CTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 31544
Score = 86.0 bits (94), Expect = 5e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || ||| || || || ||| ||||| ||||||||||| ||
Sbjct 30179 CATGCCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 30120
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| ||| ||| | || ||||||||||| || |||||||| | | |||||||| ||
Sbjct 30119 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCAGA 30060
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTT 44253
|| | |||||||| ||| |||||
Sbjct 30059 GGGAATGCCTTCCTTGTCCTGGATCTT 30033
>seq780
Length=11850152
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 44114 CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGT 44173
|||||||| | || ||| || || || ||| ||||| ||||||||||| || | ||
Sbjct 4731415 CCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGG 4731474
Query 44174 TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACA 44233
|||| | || ||||||||||| || |||||||||| |||||||| || | || |
Sbjct 4731475 GTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATG 4731534
Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCC 44293
|||||||| ||| ||||| ||||| | | |||||||| || || |||||
Sbjct 4731535 CCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCA 4731594
Query 44294 ACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
| || || ||||| || || | ||||||||| ||||| |||||| ||
Sbjct 4731595 AGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATGTTG 4731642
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| | || ||| || || || ||| || || ||||||||||| ||
Sbjct 4730952 CATGCCACCTCTCAGACGCAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTC 4731011
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || ||||||||||| || |||||||||| |||||||| || |
Sbjct 4731012 TGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGG 4731071
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||||| | | |||||||| || ||
Sbjct 4731072 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 4731131
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || | ||||||||| ||||| ||||||
Sbjct 4731132 GACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATG 4731183
Score = 125 bits (138), Expect = 5e-24
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | ||| || || || ||| ||||| ||||||||||| ||
Sbjct 4731180 CATGCCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTC 4731239
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || |||| | || ||||||||||| || |||||||||| |||||||| || |
Sbjct 4731240 TGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGG 4731299
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | |||||||| ||| ||||| ||||| | | |||||||| || ||
Sbjct 4731300 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTC 4731359
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 4731360 GACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 4731411
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | ||| || || || ||| ||||| ||||||||||| || |
Sbjct 4730728 CCACCCCTCAGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 4730787
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| | || ||||||||||| || || ||||||| |||||||| || | ||
Sbjct 4730788 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCGAAGATCAGCCGCTGCTGGTCAGGGGGA 4730847
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| |||||||| ||| ||||| ||||| | | |||||||| || || |||
Sbjct 4730848 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACC 4730907
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| | || || ||||| || || ||||||||||| ||||| ||||||
Sbjct 4730908 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 4730955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359964676773471
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