Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq672 122 6e-23 seq958 98.7 7e-16 >seq672 Length=2938938 Score = 122 bits (134), Expect = 6e-23 Identities = 93/110 (85%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| || ||| ||||||| || | |||||||||| |||||||||| || ||||||||||| Sbjct 893188 CTTGAGCTCCCTGCTGAGCACGATATTAATTCTGTCTTTTAAAGGACGATTCTTCTCAGG 893247 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCTG 4399 ||| |||||||| || ||| ||||||| |||||| |||||||||| ||| Sbjct 893248 AATGGAGAACCAGGTTTTTCTACCCATGATCACTGCATTCTGTTTACCTG 893297 >seq958 Length=4449282 Score = 98.7 bits (108), Expect = 7e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||||||||| || ||||||||||| || ||||| || ||||| | ||| || | Sbjct 4054495 CTTTGTATTCTGCTCCAAAGTGCCTCCACTGGAACCCATAAACTGGTCCCAAATCCCCCT 4054436 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| |||||| | ||||| | || | |||||||| |||||||||| Sbjct 4054435 CCTCTCTGGTGCTAAAACCTTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAA 4054376 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTG 102181 | | ||| || ||| || ||||||||| Sbjct 4054375 TCTTCACACCTTTTGCAGAGAGCTCTTTG 4054347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361220288299271