Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq296 156 5e-33 seq984 122 1e-22 >seq296 Length=115273 Score = 156 bits (172), Expect = 5e-33 Identities = 205/282 (73%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 83119 GGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGGCA 83178 |||| |||||| | || | | |||||||||||||||||||| | |||||||||||| Sbjct 4925 GGGCACGCCGTCGGGGCCGATGAGGAACTTCTCGAAGTTCCAGGAGATGTCGTTGCGGCA 4984 Query 83179 CACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTAGG 83238 || || |||||| ||| ||| |||| | ||| |||| | ||| ||| || Sbjct 4985 GACGGGGGACCAGATGATGTACTGCGGGTTGGTCATCAGCGAGGAGGGGTCATCGTGCGG 5044 Query 83239 CGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGC--CCTTGCACCGTTGACC 83296 ||||| |||||| ||||||| |||||| || || || |||| | |||| ||| Sbjct 5045 GAAGGGCAGCGCCTCTTTCAGGAAGGTGAAGAGGGGGTGCGCGTCCTTCC--CGTTCACC 5102 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||| | || || || |||| | ||||||| || ||||| ||||||| | Sbjct 5103 TCGCACTTCTCGAACATGATGAAATTGGGCTTGTAGCCGTTGCCGGGACGTACGTGCTCC 5162 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGGTGA 83398 || || ||| |||||| | |||| || || |||||| || Sbjct 5163 AGCGAGAGCAGGATCTCCTCGTTCTTAGCATTCTCCTGGAGA 5204 >seq984 Length=1324844 Score = 122 bits (134), Expect = 1e-22 Identities = 221/312 (71%), Gaps = 16/312 (5%) Strand=Plus/Minus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCAC--GGCCAGGGTCTGGCAGCGGTGGCTGTACCTG 83113 ||| ||| || |||||||||||||| || | ||| | |||| ||||||| | Sbjct 560891 GAGGAGGCGCTGGATGTCGGGCTCCAGCTGGGC--GGTGGGCGTGCGGGGGCTGTAGCGC 560834 Query 83114 CGCACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTG 83173 || | || || || | |||||||| ||||||||| |||||||||| | ||| | Sbjct 560833 CGGAAAGGTTCCCCCTCGGGACCCACCAGGAACTTCTCAAAGTTCCAGGAGATGTCAGAG 560774 Query 83174 CGGCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGC-TCATGTCGTC 83232 || | ||| ||| ||||| | || |||| || || || |||| || ||||| Sbjct 560773 CGCCGCACGGGACTCCAGGTGAGGAAGCGGGGCTCAGCCATCAG-GTGCGTCGCCTCGTC 560715 Query 83233 GCTAGGCGCCGGCAGG---GCCTCTCGTAGGAAGGCGAAGAGCGGATG--TGCCCTTGCA 83287 | ||||| |||||| |||| || ||| ||||||||| || || || ||| || Sbjct 560714 GGCTGGCGCGGGCAGGTGAGCCT-TC--AGGTAGGCGAAGACGGGGTGGGTGTCCT-GC- 560660 Query 83288 CCGTTGACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGG 83347 ||||| |||| |||||||| |||||| | ||||| ||||||||||| ||| || || Sbjct 560659 CCGTTCACCTGGCACTTCTGGAAGAGGGTGAAGTTGGGCTCGAAGCCACCCCCTGGCCGC 560600 Query 83348 ACGTGCTTCAGG 83359 |||||||||||| Sbjct 560599 ACGTGCTTCAGG 560588 Score = 109 bits (120), Expect = 7e-19 Identities = 119/156 (76%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 83388 TTTCCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTA 83447 || |||||| || || ||||| || ||||| || ||||| ||||||| ||| | || Sbjct 560467 TTACCTGGTAGCCAAATTGGTTGCAGGGGAAGCCCAGCACGACCAGCCGCCGGGGA--TA 560410 Query 83448 GGCGCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACG 83507 | | | ||||||| ||| | ||| ||||| ||||| ||||| | ||||||||||| | Sbjct 560409 GCGGGCT-TGCAGCTGGTTGAGCTGGGTGTAGTCCCGCACCGTAGTGCCTCAGAGGGATG 560351 Query 83508 CTACGTTCTCGATGAGCAAGACCCGGCCCCGTAAGA 83543 | |||||||||||||| | || |||||||| |||| Sbjct 560350 CCACGTTCTCGATGAGGACCACGCGGCCCCGGAAGA 560315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608743370470840