Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq832 123 2e-23 seq339 118 9e-22 >seq832 Length=5409120 Score = 123 bits (136), Expect = 2e-23 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||| | ||| | ||||| || || || ||||| ||||| | || Sbjct 329671 CCCCTC--AGGCGGAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACA 329728 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| | | || |||||||| ||||| ||| | || || ||||| ||||| ||| | Sbjct 329729 GGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGTTGGTCAGGGGGAA 329788 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 |||||||||||| |||||| ||||| | | | || |||| |||||| | Sbjct 329789 TGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCT 329848 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGAA 21181 | | ||| ||||||||||| || || || || ||||| || ||||| ||||| Sbjct 329849 CAAGGGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATGTTGAA 329900 Score = 122 bits (134), Expect = 7e-23 Identities = 163/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||| | ||| | ||||| ||||| || ||||| ||||| | || Sbjct 328987 CCCCTC--AGACGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACA 329044 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| | |||| |||||||| ||||| ||| | || || | ||||||||| ||| | Sbjct 329045 GGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCAGGGGGAA 329104 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 |||||||||||| |||||| ||||| | | | || |||| |||||| | Sbjct 329105 TGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCT 329164 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | | ||| ||||||||||| || | || || ||||| || ||||| Sbjct 329165 CAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329210 Score = 116 bits (128), Expect = 3e-21 Identities = 162/226 (72%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||| | ||| | ||||| ||||| || ||||| ||||| | || Sbjct 329443 CCCCTC--AGGCGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACA 329500 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| | | || |||||||| ||||| ||| | || || | ||||||||| ||| | Sbjct 329501 GGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAA 329560 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 |||||||||||| |||||| ||||| | | | || |||| |||||| | Sbjct 329561 TGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCT 329620 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | | ||| ||||||||||| || | || || ||||| || ||||| Sbjct 329621 CAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329666 Score = 113 bits (124), Expect = 4e-20 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009 |||||| || | |||||| | ||| | ||||| || || || ||||| ||||| | || Sbjct 329215 CCCCTC--AGGCGGAGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACA 329272 Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069 |||| | | || |||||||| ||||| ||| | || || | ||||||||| ||| | Sbjct 329273 GGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAA 329332 Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129 |||||||||||| |||||| ||||| | | | || |||| |||||| | Sbjct 329333 TGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCT 329392 Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 | | ||| ||||||||||| || | || || ||||| || ||||| Sbjct 329393 CAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329438 >seq339 Length=1012135 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 ||||| | ||||| ||||| ||||| || ||||| ||||| | || || | | || Sbjct 49926 AGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCT 49867 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||||||| ||||| ||| | || ||||||||||| || ||| | |||||||||||| Sbjct 49866 TCCAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCC 49807 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| ||||| | | | || |||| |||||| ||||| ||| ||||| Sbjct 49806 TGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTT 49747 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 ||||| || | || || || || || |||||||| Sbjct 49746 TTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 49712 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 ||| || || | ||| | ||||| | ||||| ||||| ||||| || ||||| ||||| Sbjct 50173 GTTACCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTC 50114 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 | || || | | || |||||||| ||||| ||| | || ||||| ||||| || Sbjct 50113 AGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGG 50054 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 ||| | |||||||||||| |||||| || || | | | || |||| |||||| Sbjct 50053 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTC 49994 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||| ||||||||||| || | || || ||||| || ||||| Sbjct 49993 AACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 49943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422223067940036