Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq339 170 2e-37 seq832 145 8e-30 seq319 93.3 4e-14 seq607 84.2 2e-11 >seq339 Length=1012135 Score = 170 bits (188), Expect = 2e-37 Identities = 179/233 (77%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 ||||||||| || ||||| || || || || ||||||||||||||| | || || || | Sbjct 49711 AAAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCCTGGAAGTTGAGCC 49770 Query 40746 CACCGACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 || |||| | || |||| | |||| || || | ||||| || ||||| ||| | | Sbjct 49771 CAGTGACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 49829 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 | ||||| ||||||||| || ||||| |||||||| || | ||||| ||| |||| Sbjct 49830 ATCAGCAGAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACT 49889 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| |||| |||||||||||| ||||| ||||||| ||| Sbjct 49890 ACAACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 49942 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 49943 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 50002 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | ||||| || ||||| ||| | || || Sbjct 50003 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 50061 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| ||||||||| || ||||| |||||||| || | ||||| ||| |||||||| Sbjct 50062 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 50121 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| |||| |||||||||||| ||||| ||||||| || Sbjct 50122 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 50169 >seq832 Length=5409120 Score = 145 bits (160), Expect = 8e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || ||||| ||| Sbjct 329666 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 329607 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| || ||||| ||| | |||||| Sbjct 329606 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 329547 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 329546 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 329487 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| |||| || ||||| ||| | ||| ||||||| ||| Sbjct 329486 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 329439 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || ||||| ||| Sbjct 329210 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 329151 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| || ||||| ||| | |||||| Sbjct 329150 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 329091 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| |||| ||||||||| ||||||||| Sbjct 329090 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCAGACTACAAC 329031 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||| |||| || ||||| ||| | || ||||||| || Sbjct 329030 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGTCTGAGGGGTGG 328984 Score = 141 bits (156), Expect = 1e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || ||||| ||| Sbjct 329438 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 329379 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| || ||||| ||| | |||||| Sbjct 329378 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 329319 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 329318 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 329259 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| || |||| || ||||| ||| | ||| ||||||| ||| Sbjct 329258 ATCCAGAAAGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 329211 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || | || ||||| ||||||||| | || ||||| || Sbjct 329897 AACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 329838 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | ||||| || ||||| ||| | ||| Sbjct 329837 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 329778 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || | || |||| || ||||| |||||||| || | ||||||||| |||||| Sbjct 329777 CAACAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTAC 329718 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| || |||| || ||||| ||| | ||| ||||||| ||| Sbjct 329717 AACATCCAGAAAGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 329667 >seq319 Length=11147124 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| ||||| || || || || ||| ||||||||||||| || || || ||||||| Sbjct 5779437 TGGTTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTT 5779496 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| |||||| | ||||| ||||| || ||||||||| ||| || || || ||| | Sbjct 5779497 GGCTGAAGAAAAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGCAGAG 5779556 Query 117162 ACGAGG 117167 | |||| Sbjct 5779557 ATGAGG 5779562 >seq607 Length=878621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 40792 GGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGC 40851 || |||||| | |||||||| || || |||| ||||||||| |||||||| || | ||| Sbjct 312530 GGGATCCCCCCCGACCAGCAGCGGCTGATCTTCGCGGGCAAGCAGCTGGAGGATGGACGC 312471 Query 40852 ACCCTCAACGACTACAACATCCAGAA 40877 ||||| ||||||||||||||||| Sbjct 312470 ACCCTTGCAGACTACAACATCCAGAA 312445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515173983074960