Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq213 116 3e-21 seq832 105 6e-18 seq339 100 3e-16 seq319 86.0 6e-12 >seq213 Length=2372662 Score = 116 bits (128), Expect = 3e-21 Identities = 120/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || ||||| || ||||| ||||| |||||||| || || || || Sbjct 2160001 ACCTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTC 2159942 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 ||||| || ||| ||||| ||||| ||||| || || |||||||||||||| || ||| Sbjct 2159941 CCCAAGTTCTGCTGATTGCTCTTTCGGTTGCAAGAGTCTTTGTAGAGCATGTATGGTGTG 2159882 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACA 23204 || ||||| ||| || || ||||| || ||||| Sbjct 2159881 CCAGTCTCCGTCTGTGATTCAATGATAGCGTACCACA 2159845 >seq832 Length=5409120 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| || |||||| | || || || || Sbjct 329439 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 329380 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || |||||||| Sbjct 329379 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 329320 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || |||||||| ||| ||||||| || || || || || Sbjct 329319 GCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAA 329260 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || |||||||| || || ||||| || || | |||||||| || Sbjct 329259 CATCCAGAAAGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 329212 Score = 102 bits (112), Expect = 7e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| || |||||| | || || || || Sbjct 329211 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 329152 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || || ||||| Sbjct 329151 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCA 329092 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || |||||||| ||| |||||||| || || || || || Sbjct 329091 GCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCAGACTACAA 329032 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||| || || ||||| || || ||||| || || | |||||||| ||| Sbjct 329031 CATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGTCTGAGGGGTGGT 328983 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| || |||||| | || || || || Sbjct 329667 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 329608 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || |||||||| Sbjct 329607 TGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCA 329548 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || |||||||| ||| ||||||| || || || || || Sbjct 329547 GCAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAA 329488 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||| || || ||||| || || ||||| || || | |||||||| || Sbjct 329487 CATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 329440 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 |||||||| || || || ||||| |||| ||||| || |||||| | || || || || Sbjct 329897 AACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 329838 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 |||| | || | || || | || ||||||||||||| | || || ||| Sbjct 329837 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 329778 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 || ||| | || || || |||||||| ||| ||||||| || || || || Sbjct 329777 CAACAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTAC 329718 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| || |||||||| || || ||||| || || | |||||||| || Sbjct 329717 AACATCCAGAAAGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGG 329668 >seq339 Length=1012135 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248 ||| ||||| || ||||| ||||| ||||| |||||||| |||||| | || ||||| || Sbjct 49711 AAAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCCTGGAAGTTGAGCC 49770 Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 |||| | || | || || | || ||||||||||||| | || || || Sbjct 49771 CAGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGA 49830 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATT 31367 |||||| | || || || |||||||| ||| ||||||| | | | || | || | Sbjct 49831 TCAGCAGAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACT 49889 Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 | ||||| || || ||||| || || ||||| || || | |||||||| || Sbjct 49890 ACAACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 49941 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 49942 CATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAG 50001 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | || || | || ||||||||||||| | || ||||| || Sbjct 50002 TGACACCATTGAGAACGTAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 50061 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| | || || || |||||||| ||| ||||||| | | | || | || || | Sbjct 50062 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGA-TGGACGCACGCTCTCTGACTACA 50120 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || || ||||| || || ||||| || || | |||||||| |||| Sbjct 50121 ACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGTA 50171 >seq319 Length=11147124 Score = 86.0 bits (94), Expect = 6e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || || || || ||||| || ||||||||||| |||||| || ||||||||| || Sbjct 5779442 GCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTTGGCTG 5779501 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTT 58072 |||||| | ||||||||||| || ||||| || Sbjct 5779502 AAGAAAAGGGGCCTGATGCCTGGACTGACTTT 5779533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445727278426320