Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq319 120 4e-22 seq745 111 2e-19 seq213 91.5 2e-13 >seq319 Length=11147124 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| || || || || ||||| ||||| ||||| | || | Sbjct 5779562 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCT 5779503 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||||||||| | ||| || || || ||||||||||| ||||| ||||||||||||| Sbjct 5779502 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 5779443 Query 33724 CAATAAGTCTCTCTCC 33739 ||| | |||||| || Sbjct 5779442 CAACCACTCTCTCACC 5779427 Score = 84.2 bits (92), Expect = 3e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 33969 TTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATAT 34028 |||||||| || ||||||||||||||||||||||| |||| ||||| ||||| ||| Sbjct 5774811 TTTTCATTTACAATTCCATCACTGGCTGCAAAAAATGCCAGAACATGAGAGATAAAGTAT 5774752 Query 34029 TTTTCGTCTGGTGTTAGTTTATTCCA 34054 ||||| |||| | | || || ||||| Sbjct 5774751 TTTTCATCTGCTTTCAGCTTGTTCCA 5774726 >seq745 Length=18327016 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| |||||||| |||| ||| || ||||| |||||||| ||||||| || | || | Sbjct 16058346 CCTCATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCT 16058287 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | |||||||| || || || || || || ||||||||||||||||| ||||| ||||| | Sbjct 16058286 TCAGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAG 16058227 Query 33724 C 33724 | Sbjct 16058226 C 16058226 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 33276 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCT 33335 ||||||||||||||| | || |||||||| || | || || || ||||| || || ||| Sbjct 16059622 GACATAACTCCCATTCTCTGATATTCACCTACTCTCTTCTCAAAGAAATTGGTCTTGCCT 16059563 Query 33336 TCCAATGATATATTTTCCATGAAATCAAACGGATT 33370 |||| || || ||||||||||| ||||| ||||| Sbjct 16059562 TCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATT 16059528 >seq213 Length=2372662 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326 ||||| ||||| ||||||||||||||||| || || | || || ||||| | || || Sbjct 2158620 ACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGC 2158561 Query 63327 TCCTCGTTTCCTGTATTCTT-TTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385 || || || || || ||||| |||||| || || ||| | | ||||| ||||||| || Sbjct 2158560 TCTTCTTTCCCAGTGTTCTTCTTTAAG-TCAAGAAACTCAAAGATATCCAAATGCCATGG 2158502 Query 63386 TTCCAAGTATATGGCCATAACTCCAGG 63412 |||| ||| ||||| | | | ||||| Sbjct 2158501 CTCCAGGTAGATGGCAAAAGCCCCAGG 2158475 Score = 82.4 bits (90), Expect = 1e-10 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 62604 CCGTTACTGGCGTACGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTA 62663 || |||||| || || || |||| || || || ||||||| || || || |||| | Sbjct 2163569 CCTTTACTGACGGGAGAACCCTCATACGTTTCGTACGGTCCTTGCTCCTTGGCAAGTTCA 2163510 Query 62664 CAACTCGCCTCTAATGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGT 62723 || || || || || ||||| ||||||||||| ||||| |||| || || | || Sbjct 2163509 CAGCTGGCTTCCAAAGCACCATAATAAATGGTCTCAAAAATCTGCTGGTTCAAGCGCTGG 2163450 Query 62724 GCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACA 62783 || || || || ||||| || || | | | ||| || || || || | || || ||| Sbjct 2163449 GCCTCAGGACTTTCAAAAGGGTACCTCATCAAAATGAAAGCATCTGCCAGGCCCTGCACA 2163390 Query 62784 CCAATACCGATAGGTCTATG 62803 ||||| || || || | ||| Sbjct 2163389 CCAATGCCAATGGGACGATG 2163370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629762325632880