Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq958 102 2e-16 seq319 87.8 5e-12 >seq958 Length=4449282 Score = 102 bits (112), Expect = 2e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 111389 TACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACG 111448 ||||||||| || || || | |||||| ||| || |||||||||| ||||||||||| Sbjct 4054338 TACAAATGCCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACG 4054397 Query 111449 TGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTA 111508 ||| || || ||| ||| || | || || || || ||| | ||||||||||| Sbjct 4054398 TGAGTTCCTGGATAAGCAAGGTTTTAGCACCAGAGAGGAGGGGGATTTGGGACCAGTTTA 4054457 Query 111509 CGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || || || ||| | |||||||| ||||| |||||| |||||| Sbjct 4054458 TGGGTTCCAGTGGAGGCACTTTGGAGCAGAATACAAAGATATGCAC 4054503 >seq319 Length=11147124 Score = 87.8 bits (96), Expect = 5e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 22499 TTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGC 22558 |||| ||||||| ||||||||||| |||||||| || | ||| ||| || ||||||| Sbjct 5779440 TTGCCTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCTGCTATATTTTGGC 5779499 Query 22559 TaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATG 22618 | || ||| | | | ||||| || || || || || ||||| | |||||| |||||| Sbjct 5779500 TGAAGAAAAGGGGCCTGATGCCTGGACTGACTTTCTCCAATGAACTTATTAGCAGAGATG 5779559 Query 22619 AGG 22621 ||| Sbjct 5779560 AGG 5779562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303236354790422