Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq832 96.9 3e-15 seq339 91.5 1e-13 >seq832 Length=5409120 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| ||||| || ||||||||||| | || ||| |||| Sbjct 328999 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTCT 329058 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || |||||||| ||||| || | ||| || ||||| Sbjct 329059 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCC 329118 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| | |||||| || | |||||||| Sbjct 329119 TGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 329176 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || || ||||| |||||||| Sbjct 329177 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329210 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| ||||| || ||||||||||| | || ||| | || Sbjct 329455 AGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 329514 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || |||||||| ||||| || | ||| || ||||| Sbjct 329515 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 329574 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| | |||||| || | |||||||| Sbjct 329575 TGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 329632 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || || ||||| |||||||| Sbjct 329633 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329666 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| || || || ||||||||||| | || ||| | || Sbjct 329227 AGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 329286 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || |||||||| ||||| || | ||| || ||||| Sbjct 329287 TCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCC 329346 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| | |||||| || | |||||||| Sbjct 329347 TGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 329404 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || || ||||| |||||||| Sbjct 329405 TCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329438 Score = 86.0 bits (94), Expect = 5e-12 Identities = 151/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| || || || ||||||||||| | || ||| | || Sbjct 329683 AGCACAAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCT 329742 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || |||| ||||||||| || | ||| || ||||| Sbjct 329743 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGTTGGTCAGGGGGAATGCCTTCCTTGTCC 329802 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||| | |||||| || | |||||||| Sbjct 329803 TGGATCTTGGC--CTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 329860 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || |||| || || ||||| |||||||| ||| Sbjct 329861 TCTTGCCAGTCAAGGTCTTCACAAAGATCTGCATGTTG 329898 >seq339 Length=1012135 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/222 (70%), Gaps = 12/222 (5%) Strand=Plus/Minus Query 16723 CAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 ||| || | |||||| ||||| ||||| || ||||||||||| | | || ||||| Sbjct 49927 CAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGT----GCGTC 49872 Query 16783 C----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTT 16838 | |||| || ||||| ||| | || || | ||| || || || | ||| || | Sbjct 49871 CATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGATCAGGGGGAATGCCTTCCT 49812 Query 16839 TGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGT 16896 |||| || || || |||||| | | | ||||| | |||||| ||||| ||| Sbjct 49811 TGTCCTGGATCTTGGC--CTTCACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGT 49754 Query 16897 GATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 ||||||||| || ||||| || || || || ||||||||||| Sbjct 49753 GATGGTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 49712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405053337252790