Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq832 118 1e-21 seq339 109 6e-19 seq728 93.3 5e-14 seq907 91.5 2e-13 seq496 91.5 2e-13 seq512 89.7 6e-13 >seq832 Length=5409120 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 41969 ATTAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAAT 42028 ||||| ||| | ||| || || | ||| | ||| | ||| | ||| ||||| || || Sbjct 328971 ATTAACTTAACAACCACCCCTCAGACGGAGCACAAGATGGAGGGTGGATTCCTTCTGGAT 329030 Query 42029 ATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTG 42088 ||||| || | ||| || ||| |||| || |||||||| ||||| || || || ||||| Sbjct 329031 GTTGTAGTCTGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTG 329090 Query 42089 CTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTC 42148 |||||| | || | || ||||||||| ||| || || | || | | ||||| Sbjct 329091 CTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC 329150 Query 42149 GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | || || || | |||||||| ||||| || || ||||| |||||||| ||||| Sbjct 329151 ACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 329210 Score = 105 bits (116), Expect = 7e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| || | ||| || ||| | || || |||||||| ||||| || Sbjct 329476 TCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 329535 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||||| || | || ||||||||| ||| || || | || Sbjct 329536 ATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 329595 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || | || || || | |||||||| ||||| || || ||||| ||| Sbjct 329596 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 329655 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 329656 AAGATCTGCAT 329666 Score = 102 bits (112), Expect = 9e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || ||||| || | ||| || ||| | || || |||||||| ||||| || Sbjct 329248 TCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAG 329307 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || || ||||||||||||| || | || ||||||||| ||| || || | || Sbjct 329308 ATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTC 329367 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| || | || || || | |||||||| ||||| || || ||||| ||| Sbjct 329368 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACA 329427 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 329428 AAGATCTGCAT 329438 >seq339 Length=1012135 Score = 109 bits (120), Expect = 6e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| ||| | ||||| ||| ||||| || || ||||| |||| || || || | Sbjct 49929 CGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCA 49870 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| ||||| || ||||||| |||||| || | || | || |||||| Sbjct 49869 TCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGATCAGGGGGAATGCCTTCCTTG 49810 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 ||| ||| || || | || | | ||||| || | || || || | |||||| Sbjct 49809 TCCTGGATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATG 49750 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 |||||||| || || ||||| || ||||| |||||||| Sbjct 49749 GTTTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTT 49712 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 44694 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 44635 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 44634 ATACTAACGAGGAT 44621 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 44089 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 44030 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 44029 TACTAACGAGGA 44018 >seq728 Length=4675678 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 4674319 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 4674378 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 4674379 TATACTAACGAGGA 4674392 >seq907 Length=8771646 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 7709442 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 7709383 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 7709382 ATACTAACGAGGA 7709370 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 7709548 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 7709607 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 7709608 TACTAACGAGGA 7709619 >seq496 Length=225049 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 142177 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 142118 Query 57067 TACTACCGAGGATTGAATATATAAC 57091 ||||| |||||| | | | ||||| Sbjct 142117 TACTAACGAGGAAGGGACAGATAAC 142093 >seq512 Length=74449 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 69389 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 69448 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 69449 TACTAACGAGGA 69460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543165126286640