Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq885 149 9e-31 seq346 109 8e-19 >seq885 Length=3342068 Score = 149 bits (164), Expect = 9e-31 Identities = 178/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9727 ATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGA 9786 || || | ||| ||||| |||| |||||| ||| |||| || || || || ||||| || Sbjct 3023381 ATGAGTCTAGTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 3023322 Query 9787 ACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGC 9846 | || ||||||| ||||||||| ||||||||||| || || |||||||| || ||||| Sbjct 3023321 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCCGGG 3023262 Query 9847 ACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCA 9906 || ||||||||||| || | ||| || | ||| ||| | || || || | || | Sbjct 3023261 ACCAAACCAAACACCTCCTGCCCAACAGAAAACTGCAAGTGTTCAGGTACGTGAGGAGGG 3023202 Query 9907 TACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAATAACC 9966 || | ||| | |||| || || || || || || ||||||||||| || ||||| | | Sbjct 3023201 TAGATCATCTCTGCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCATCAATCATC 3023142 Query 9967 TG 9968 || Sbjct 3023141 TG 3023140 Score = 149 bits (164), Expect = 9e-31 Identities = 215/301 (71%), Gaps = 2/301 (1%) Strand=Plus/Minus Query 8880 GGAACGCGGCCAACGGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGG 8939 |||| || | || || || || ||||| ||| || ||||| ||| | || || | Sbjct 3025351 GGAAAGCAGTGAAAGGGCAGCCTTTCACGTTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 3025292 Query 8940 TTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGG 8999 | || | || || || || || | ||| ||||||||||| |||||||||||| | |||| Sbjct 3025291 TATTGATTATTTCGAAGCCCACTTTCCCACCGAAGGTGCTAGGTTTCCAGTACTCAGGGG 3025232 Query 9000 AGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGC 9059 ||||||| | || |||| || ||||||| || || || || || | ||| | || Sbjct 3025231 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAATGGTGCTCCGATCTCCACCATTG 3025172 Query 9060 TCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTAGAGTTCG 9118 | ||||||||||||||||| || || || ||||| |||| |||| || | ||| || || Sbjct 3025171 TTTCACCGAAGATGGCACCTGGTCGTGGCTTTTCTACGA-GAAGACCTGGGTACAGCTCC 3025113 Query 9119 ACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCTACA 9178 | ||| || | ||| ||||| || |||||| || || || || || || || |||| | Sbjct 3025112 ATAGCATCAATGTCTCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTATA 3025053 Query 9179 A 9179 | Sbjct 3025052 A 3025052 Score = 93.3 bits (102), Expect = 6e-14 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612 ||||||| || | |||||| ||||||| |||||||| ||||| || |||||||||||| Sbjct 3024540 TCAGGCAGAAGCGGGTGCCAGTGGTAGAGAGTATTGAATTCGGCTGCAATTCGGTTCTGG 3024481 Query 9613 TACTGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACC 9670 || ||||| | ||| |||||| | || || ||||| | || | ||||||||| | Sbjct 3024480 TATTGAAATCGCTGGT--TGAACAGCAGTTCAGGATCAAACTTGAGTTTGAAGTGGTAGC 3024423 Query 9671 CGCTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCCGGT 9722 | || | ||||| ||||| | || | ||| || || ||||| || || Sbjct 3024422 CACTCAAGTGCTGCACATAGTCCTCAATAACAATCTTGATTGTTTCTCCTGT 3024371 Score = 84.2 bits (92), Expect = 3e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 10389 ACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTATA 10448 |||||| || || | || || ||||||||| | || || || || |||| || || Sbjct 3021458 ACCTTTAACACCCATTGGTGTTGGGCAGTCAAGTTCTACTGGTGGAAGGCTTCTTGTGTA 3021399 Query 10449 ATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGCGG 10508 |||||| ||||| ||| | ||||||||||| ||||| | |||||| ||||| || Sbjct 3021398 ATAGGAAAGATTGGAATAAGCTTCCCAGCTTTTGTAACTATAATCACTATTGTAAGTTGG 3021339 Query 10509 GGGACTGTCAATCA 10522 ||||||||||||| Sbjct 3021338 TGGACTGTCAATCA 3021325 >seq346 Length=9772987 Score = 109 bits (120), Expect = 8e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 8966 CCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCCT 9025 ||||| || || ||||||||||||||| | |||||||||||| ||| | | ||||| Sbjct 303370 CCGCCAAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGCCCC 303429 Query 9026 TTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACGC 9085 |||| |||||||||||| || | ||| | ||||| || || || || || ||| | Sbjct 303430 TTCAGGGAAAACGGAGCTCCAATCTCCACCATGCTTTCCCCAAAAATACCATTGGGTTGG 303489 Query 9086 GGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGCT 9145 ||||| || | | ||||| | |||| || | ||| || | ||| || || || || Sbjct 303490 GGTTTCTCAAGCAGTAAGCCTGGATAGAACTCCAGAGCATCAATGTCTCCGTACAGCTCT 303549 Query 9146 TCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 |||| ||| || || |||| | ||| ||| Sbjct 303550 TCCAGCTCTGCTGCATTCTCTTCCTCTCCT 303579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723664483821400