Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq339 147 2e-30 seq832 143 3e-29 seq319 87.8 2e-12 >seq339 Length=1012135 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||||||||| || ||||| || || || || ||||||||||||||| | || || ||| | Sbjct 49711 AAAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCCTGGAAGTTGAGCC 49770 Query 38300 CACCGACAGC-GTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || |||| | || |||| | || | || |||| ||||| || || |||||| | | Sbjct 49771 CAGTGACACCATTGAGAACG-TGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 49829 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 | || ||| | ||||| | || ||||| |||||||| || | ||||| ||| |||| Sbjct 49830 ATCAGCAGAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACT 49889 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| |||||| | || |||||| | |||||||| |||| || ||| Sbjct 49890 ACAACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGC 49942 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || || ||| ||| Sbjct 49943 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCTTGGAGGTTGAGCCCAGT 50002 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| ||||| || || |||||| |||| || Sbjct 50003 GACACCATTGAGAACG-TAAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCA 50061 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || | ||||| | || ||||| |||||||| || | ||||| ||| |||||||| Sbjct 50062 GCAAAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTACAA 50121 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| |||||| | || |||||| | |||||||| |||| || || Sbjct 50122 CATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGG 50169 >seq832 Length=5409120 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| ||| Sbjct 329210 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 329151 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || |||||| | ||||| Sbjct 329150 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGACCAG 329091 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 |||||||| || | || ||||| |||||||| |||| ||||||||| ||||||||| Sbjct 329090 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGACGGGCGCACCCTGTCAGACTACAAC 329031 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| |||||| | || || ||| | ||||| ||| |||| || || Sbjct 329030 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGTCTGAGGGGTGG 328984 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| ||| Sbjct 329666 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 329607 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || |||||| ||||||| Sbjct 329606 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 329547 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 |||||||| || | || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 329546 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 329487 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| |||||| | || || ||| | ||||| || |||| || ||| Sbjct 329486 ATCCAGAAGGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 329439 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| ||||||||| | || |||||| ||| Sbjct 329438 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 329379 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| || || |||||| ||||||| Sbjct 329378 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 329319 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 |||||||| || | || ||||| |||||||| || | ||||||||| ||||||||| Sbjct 329318 CAGCGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTACAAC 329259 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| | || || ||| | ||||| || |||| || ||| Sbjct 329258 ATCCAGAAAGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 329211 Score = 129 bits (142), Expect = 6e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || || || || | || ||||| ||||||||| | || |||||| || Sbjct 329897 AACATGCAGATCTTTGTGAAGACCTTGACTGGCAAGACCATCACCCTTGAGGTCGAGCCC 329838 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | | || | || |||| ||||| || || |||||| | ||| Sbjct 329837 AGTGACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAC 329778 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||| |||| || | || ||||| |||||||| || | ||||||||| |||||| Sbjct 329777 CAACAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGGCGCACCCTGTCAGACTAC 329718 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||| || ||| | || || ||| | ||||| || |||| || ||| Sbjct 329717 AACATCCAGAAAGAATCCACCCTCCATCTTGTGCTCCGCCTGAGGGGTGGC 329667 >seq319 Length=11147124 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| || ||| ||| ||||| ||| |||||||| || ||||| ||||| | ||| | Sbjct 5779562 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCT 5779503 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||||||||| || || || ||||||||||||| ||| || || || || || | Sbjct 5779502 TCAGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGG 5779443 Query 133037 CCACCA 133042 | |||| Sbjct 5779442 CAACCA 5779437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500128903584640