Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq878 123 2e-22 seq940 102 6e-16 seq688 95.1 9e-14 >seq878 Length=2428478 Score = 123 bits (136), Expect = 2e-22 Identities = 897/1436 (62%), Gaps = 24/1436 (2%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||| | ||||| || |||||||||||||| | ||||| ||||| ||||| || ||||| Sbjct 1881696 GCACTGACATTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCAATCTGGGGGACT 1881637 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | | || || || || || || | || | ||||| || || || ||| Sbjct 1881636 CCACGGGGTGCTGGGGGAATGCCCGTTAAGTCGAACTTGCCCAGCAAGTTGTTGTCCTTA 1881577 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAAT 517436 || | || ||||||||| | | |||| || | ||| | | || || || || | Sbjct 1881576 GTCATAGCTCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCCGAGT 1881519 Query 517437 AAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 517495 | || || || |||| ||| ||| ||||| || ||||| | | || | | | Sbjct 1881518 AGGTGGTGAAGG-TCTGAGTTTGTTTGGTGGGAATAGTGGTGTTGCGCTTGATGAGAGCG 1881460 Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||| | ||||| || || || | || || || ||||| |||||||| | || | Sbjct 1881459 GTCATCACTCCACCAGCCGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGC 1881400 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 517615 | || || | || ||| | | || | |||||||||||||| | |||||| ||| Sbjct 1881399 AGATCCTGCACATTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGCACAGCAGCGCCA 1881340 Query 517616 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 517675 || |||||||||||||| || || | | | || || | ||| |||||||| || | Sbjct 1881339 TAAGCAACAGCTTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCC 1881280 Query 517676 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 517735 || || | | | ||| || ||||| | || || || || | ||||| || || Sbjct 1881279 TGTAGCAGCTTTTGGATCTTGGGGATACGGGTAGAGCCACCCACCAGCACAATCTCCTGT 1881220 Query 517736 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCT 517795 | ||| || || || || | ||| | | | || || || || || || | Sbjct 1881219 ATCTGACCCTTGTCAAGCTTGGCATCACGCAGAGCCTTCTCCACAGGCTCCAGGGTGCCA 1881160 Query 517796 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 517853 | || | || | | || || ||||| || | ||| || || | || || | Sbjct 1881159 CGGAAAAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGT--GATGGAGGTGTAGAAGT 1881102 Query 517854 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 |||| || ||| | | ||||||| ||||| ||| ||| || ||||| || | | Sbjct 1881101 CAATGCCCTCGTAGAGGGAATCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGGGTGC 1881042 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAA 517971 | || || | ||||| || || | || | | | || | ||| ||| | | Sbjct 1881041 GCTTTGCCCTCTCACAAGCCGTACGCAGCCGCCTCACTGC--TCGCTTGTTGCCAGCAAT 1880984 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCA 518029 || ||| | || | |||||| ||||| |||| ||| | || | || || ||| Sbjct 1880983 GTCGCGTTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATGCGGTTGTCA 1880926 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 || || || || |||| | || | || | || | | || | || | |||||| Sbjct 1880925 AAGTCCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATTCCATCC 1880866 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| | | || | |||||| || || ||||||| ||||| || || |||||| Sbjct 1880865 TCAATGGTAAGAATGGACACATCAAAAGTACCCCCACCCAAGTCAAAGATGAGAACATTC 1880806 Query 518150 ATTTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203 | ||| | || || || || | ||||| || | |||||| || || || Sbjct 1880805 TTCTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGGGC 1880746 Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263 ||||| ||||| | || |||||||| |||| || | || |||||||| || || || Sbjct 1880745 TCATTGATAATACGCATCACATTAAGGCCAGTGATGGTGCCAGCATCTTTGGTAGCCTGG 1880686 Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCA 518323 | || || || || || || ||||| || || || || |||| |||| || Sbjct 1880685 CGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCATTCTGCACTTTGCGCCCC 1880626 Query 518324 ATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGG 518383 | ||| || || | | ||||| || | | | ||| || || | |||||| Sbjct 1880625 AGATAGGCCTCAGCAATCTCCTTCATCTTGGTAAGGACCATGGAGCTGATCTCCTCTGGG 1880566 Query 518384 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 518443 | | ||| ||| | || |||| | | || || ||| |||| Sbjct 1880565 AAGAAGGTCTTCATCTCACCCTTGTACTCCACTTGCACCTTGGGCTTGCCACCCTCATTC 1880506 Query 518444 ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 518503 | || || ||||||| ||||| || || || || | |||||| | | | | Sbjct 1880505 ACCACACGGAAGGGCCAGTGCTTCATGTCAGACTGCACTGTGGGGTCATCATACTTGCGG 1880446 Query 518504 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTG 518563 || || | || || |||||||| || || ||||| || || || || | || | ||| Sbjct 1880445 CCGATGAGGCGCTTGGCATCAAAGATGGTGTTGGTAGGGTTCATAGCCACCTGGTTCTTG 1880386 Query 518564 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 518623 || ||||| ||||| || | || || || || || | ||||| || || ||||| Sbjct 1880385 GCAGCATCACCAATAAGGCGCTCCGTATCAGTGAAGGCCACATAGCTGGGTGTGGTGCGG 1880326 Query 518624 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACA 518679 || || ||||| || || || || || || || |||| || | ||||| || || Sbjct 1880325 TTGCCCTGATCGTTGGCGATGATCTCCACCTTGCCATGCTGGAAGACACCCACGCA 1880270 >seq940 Length=5565825 Score = 102 bits (112), Expect = 6e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 366993 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 367052 ||| || || ||| | || ||||| ||||| || |||||| | ||| | | | ||||| Sbjct 782899 TGTTGTGGCTACAGTGGCGTTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 782958 Query 367053 TCATTATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 367112 ||||||||| || || ||| | || ||| ||||||||||||||||| ||||| ||||| Sbjct 782959 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 783018 Query 367113 TGATGG 367118 |||||| Sbjct 783019 TGATGG 783024 >seq688 Length=1735070 Score = 95.1 bits (104), Expect = 9e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| |||||||||||||| |||||| |||||| || || ||||| || |||| Sbjct 652154 CAAAAACCGTATTGGTTGGATTCATTGCAACTTGATTCTTTGCAGCATCGCCGATCAACC 652213 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 || || ||||| || | ||| || ||| || || || || || || ||||| |||| Sbjct 652214 TCTCAGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTGCCCTGGTCATTGGCAA 652273 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | ||||| || || || | || | || || ||||| | | || || || | ||||| Sbjct 652274 TGATTTCCACCTTCCCGTGCTGGAAGACGCCAACACAGGAATAGGTGGTGCCAAGATCAA 652333 Query 518703 TACCAATAGC 518712 | |||| ||| Sbjct 652334 TTCCAACAGC 652343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780473994852826