Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq339 113 3e-20 seq832 111 1e-19 >seq339 Length=1012135 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 || || ||||||| | || || | || | ||| ||| ||||| ||||| ||||| Sbjct 50172 TTACCACCCCTCAGGCGCAGCACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCA 50113 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || || | ||| |||| |||||||| || || ||||| || |||| |||||| || | Sbjct 50112 GAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGG 50053 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931 || | || |||||||| ||||| || ||| | || | |||| || |||| Sbjct 50052 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCA 49993 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| ||||| || || || || |||||||||||||||||||| Sbjct 49992 ACCTCCAAGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 49943 Score = 109 bits (120), Expect = 4e-19 Identities = 141/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || || | ||| |||| |||||||| || || ||||| Sbjct 49906 TTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCCAGCTGCTTGCCAGCAAA 49847 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || |||| ||||| || | || | || |||||||| ||||| || ||| Sbjct 49846 GATGAGTCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCACGTT 49787 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | |||| || |||||| || | ||| |||||||| || || || |||||||| Sbjct 49786 CTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTTTTGCCAGTCAGGGTCTTCAC 49727 Query 34970 AAAGATCTGCATATT 34984 ||||||||||| || Sbjct 49726 GAAGATCTGCATTTT 49712 >seq832 Length=5409120 Score = 111 bits (122), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| ||||| || ||| | || |||| |||||||| || || ||||| Sbjct 329247 TTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 329306 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || |||||||| ||||| || || | Sbjct 329307 GATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 329364 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | |||| || ||| || || | ||| ||||| || || || || |||||| Sbjct 329365 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 329424 Query 34968 ACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 329425 ACAAAGATCTGCAT 329438 Score = 105 bits (116), Expect = 4e-18 Identities = 141/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || ||| | || |||| |||||||| || || ||||| Sbjct 329475 TTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 329534 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || |||||||| ||||| || || | Sbjct 329535 GATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 329592 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | |||| || ||| || || | ||| ||||| || || || || |||||| Sbjct 329593 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 329652 Query 34968 ACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 329653 ACAAAGATCTGCAT 329666 Score = 102 bits (112), Expect = 5e-17 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || ||| | || | || |||||||| || || ||||| Sbjct 329019 TTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAA 329078 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || |||||||| | || | || |||||||| ||||| || || | Sbjct 329079 GATCAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 329136 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | |||| || ||| || || | ||| ||||| || || || || |||||| Sbjct 329137 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTC 329196 Query 34968 ACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 329197 ACAAAGATCTGCAT 329210 Score = 98.7 bits (108), Expect = 6e-16 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| ||||| || ||| | || |||| |||||||| || || ||||| Sbjct 329703 TTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAA 329762 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | || ||||| | || | || |||||||| ||||| || || | Sbjct 329763 GATCAGCCTCTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTCAC--A 329820 Query 34910 TGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTC 34967 | || || | |||| || ||| || || | ||| ||||| || || || | |||||| Sbjct 329821 TTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGTCAAGGTCTTC 329880 Query 34968 ACAAAGATCTGCATATT 34984 |||||||||||||| || Sbjct 329881 ACAAAGATCTGCATGTT 329897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324605821610088