Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq832 104 2e-17 seq339 93.3 3e-14 >seq832 Length=5409120 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| |||||||| || || ||||| || | | || | |||| |||| || Sbjct 329235 ATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTG 329294 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| ||||| || ||||| ||||||||||| || || || || || Sbjct 329295 CTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 329354 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 329355 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 329414 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 329415 CAGGGTCTTCACAAAGATCTGCATG 329439 Score = 104 bits (114), Expect = 2e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| |||||||| || || ||||| || | | || | |||| |||| || Sbjct 329691 ATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTG 329750 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| | |||||| || || ||||||||||| || || || || || Sbjct 329751 CTTGCCAGCAAAGATCAGCCTCTGTTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATCTT 329810 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 329811 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 329870 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || || || ||||| ||||||||| Sbjct 329871 CAAGGTCTTCACAAAGATCTGCATG 329895 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| ||||| ||||| || || || ||||| || | | || | |||| |||| || Sbjct 329463 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCATCTTCCAGCTG 329522 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || ||||| |||| ||||| || ||||| ||||||||||| || || || || || Sbjct 329523 CTTGCCAGCAAAGATCAGCCGCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 329582 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | || || ||||| |||| || ||||| || Sbjct 329583 GGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCAGT 329642 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 | || || ||||| ||||||||| Sbjct 329643 CAGGGTCTTCACAAAGATCTGCATG 329667 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | ||| | || | ||| ||||| ||||| || || || ||||| || | Sbjct 328984 CCACCCCTCAGACGGAGCACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCTGAC 329043 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | || |||| ||||| || ||||| |||| ||||| || || || ||| Sbjct 329044 AGGGTGCGCCCGTCTTCCAGCTGCTTGCCAGCAAAGATCAGCCGCTGCTGGTCAGGGGGA 329103 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || || || || || ||| | || | |||||| | || || Sbjct 329104 ATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCACTGGGCTCGACC 329163 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| |||| || ||||| || | || || ||||| ||||||||| Sbjct 329164 TCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATG 329211 >seq339 Length=1012135 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||| ||| ||||| ||||| || || || ||||| || | || || | |||| ||| Sbjct 49923 ACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCC 49864 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | | ||| ||||| || ||||||||||| || || || Sbjct 49863 AGCTGCTTGCCAGCAAAGATGAGTCTCTGCTGATCAGGGGGAATGCCTTCCTTGTCCTGG 49804 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || || | || | |||||| | || ||||| || |||| |||||| Sbjct 49803 ATCTTGGCCTTCACGTTCTCAATGGTGTCACTGGGCTCAACTTCCAGGGTGATGGTTTTG 49744 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || |||||||| Sbjct 49743 CCAGTCAGGGTCTTCACGAAGATCTGCAT 49715 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 |||| ||| ||||| ||||| || || || ||||| || | || || | |||| ||| Sbjct 50151 ACTAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGTCCATCTTCC 50092 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| || | | || |||||||| ||||||||||| || || || Sbjct 50091 AGCTGCTTGCCAGCAAAGATGAGTCTTTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 50032 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || ||||| | || | |||||| | || || || | |||| || ||| Sbjct 50031 ATCTTGGCCTTTACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTG 49972 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || | || || ||||| ||||||||| Sbjct 49971 CCAGTCAGGGTCTTCACAAAGATCTGCATG 49942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396244491076497