Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq839 215 6e-51 seq840 154 2e-32 >seq839 Length=7456752 Score = 215 bits (238), Expect = 6e-51 Identities = 647/993 (65%), Gaps = 13/993 (1%) Strand=Plus/Minus Query 160045 TGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATT 160104 ||||||||| | || |||| |||| || || || |||||| || || || | Sbjct 1340428 TGTGTCGCAAGTACTCTTCCAAGCATTTCACTGCAAAAGGGTCAACATCAGTATCAAACT 1340369 Query 160105 TATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACA 160164 |||| || || | ||||| |||| ||| | ||||| || ||||| ||| || | Sbjct 1340368 TATTAGCAAAGAAGTGGTGGT--TTCT-TAGCACCCAGTTCAGATCTCCTACCCCAAAAA 1340312 Query 160165 CGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGT 160224 | ||||| || || | ||| || || ||||| || ||||| | || ||||| | | || Sbjct 1340311 CACAGACAGAGCGAACGTGAACTCCATTGCATGGTGGGTAAGGTGCACCTTTGGATATGT 1340252 Query 160225 CACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGT 160284 |||||||| ||||||||||||| ||||||||||| | || | |||||| || || | Sbjct 1340251 CACCTTCGAAGTACTGCCACTTGACAAACCTGGCCAGTGCATTCATGTCAGAAACATCAT 1340192 Query 160285 ATTTGTACATCAG-GGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 | |||| || || | ||| ||||| || || | || || | ||| | || |||||| Sbjct 1340191 ACTTGT-CACTAGAAGAAACTGCACCTGGGACTTCAGGGATTCTCTGAATTGTTGCCCAC 1340133 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTG 160403 |||| || || |||||||| || || || | ||| || ||||||| ||| ||| Sbjct 1340132 AGGTACTCATCTGGGCTGTAAGTATCTTTTGCCCACTCTATGAACTTAAGTATTTTGCTG 1340073 Query 160404 TCCCGCAGAACGTG----AGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGA 160459 | || || | ||| | |||| | || ||||| || || || || || Sbjct 1340072 CTTTTTAATACATGTTCTATAAACCT----TCTGCTAACTACAAAATAGGCACTACCAGA 1340017 Query 160460 GAATATCGGTATGGGTATAGGCGGCGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCC 160519 || || || | | ||| ||| | |||||| || ||||| | || Sbjct 1340016 AAAAATTGGAGTACTGAGAGGTGGCAGCTGTTTGTCTATGCCTGTGTTCTTTATTTTACC 1339957 Query 160520 TTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGT 160579 | | | | | || | || |||||||| || || | ||||| ||| || Sbjct 1339956 ATGAATAATCTCATGGTGTTTTTTCCACCTTACTTCTTTATAAACAGGCATTTTTTCTGT 1339897 Query 160580 CTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTT 160639 || | ||||| |||| | || | ||| | | || || || || |||| ||||| Sbjct 1339896 TTCCAAGCTGTTTTCACCTTTAAGGGCTTTTAATTTCTCTACTATTTCCTGGTTGGTCTT 1339837 Query 160640 GAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTG 160699 | |||||||| |||| || | |||||| | ||| ||||| || | || || Sbjct 1339836 TATAGGAAAGTCCATACCACAAAGGTTTATTAGGTATTTCCAGTTTGAACTTTTCCTGTA 1339777 Query 160700 CAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTT 160759 || || ||||||| ||||| ||||||||||| | |||||| ||||| ||||| || | Sbjct 1339776 GAGATCTTTCATGCAGTTAATGTCTGCCTGCACCCTGCTCCATGAAGCATACACAACACT 1339717 Query 160760 CTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAG 160819 ||||| | |||| | |||||| || || ||||| || || || ||| ||| || Sbjct 1339716 CTCTAACTGGCTGGAAATAAAGACATTCTCAAAACATGAGACTATGCCCTTCACAGCAGC 1339657 Query 160820 AAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTA 160879 ||| || || | |||| ||| || || | ||| || | |||||||| || || Sbjct 1339656 AAAAAAAGACTCTGGAGACTTTTTGTCAACATGAATGCAGTAAAAATTCTGAGGGGCATA 1339597 Query 160880 GATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGC 160939 ||| | || || | || || | |||||| || || |||| | ||| || ||||| || Sbjct 1339596 GATTGATCTTAGAAGTCTATCAAGCATCTCAATTTTGTGATAAACCACTATTGAGTAAGC 1339537 Query 160940 TATCGGAAACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGAT 160999 || ||||| || | || || || || | | | | |||||| || |||||| | Sbjct 1339536 AATTGGAAATTCTGCTTCTTCATTGCTGAGAGGTTCCATAATGTACTTCCGAGTCTTGGT 1339477 Query 161000 AAAATAATCACAATCCCGCGTCATGTTGATATA 161032 ||| | |||| || |||||||| ||||| Sbjct 1339476 GAAAGAGGCACAGTCTGCTGTCATGTTAATATA 1339444 >seq840 Length=2221924 Score = 154 bits (170), Expect = 2e-32 Identities = 602/934 (64%), Gaps = 22/934 (2%) Strand=Plus/Minus Query 160044 CTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAAT 160103 ||||| ||||| || || || ||||| || |||| |||| || |||||| Sbjct 31436 CTGTGGCGCAGGTGCTCCTCGAGACACATGATGGCGGCATCGTCCACCATGGGGTCGAAC 31377 Query 160104 TTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAAC 160163 || || || || || ||||| | |||||| | |||| |||||| || |||| | Sbjct 31376 TTGTTGGCCAAGAGGTGGTGC---TGCTGTAGCACCCAGGACACGTCGCCCACCCCGTAG 31320 Query 160164 ACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACG 160223 || ||||||| || |||| |||| |||| |||||||| | || || || | Sbjct 31319 ACACAGACGGCGCGCTGGTGCTGGCCGGTGCAGGGCGGGTAGGGTGCACCCTTGCTGGTG 31260 Query 160224 TCACCTTCGTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCG 160283 ||||| || |||||||||||| || | | || | || | |||||| ||| | | Sbjct 31259 TCACCCTCTAGGTACTGCCACTTGACCAGGCGGGGCAGGGCATTCATGTCCGAGAGCTGG 31200 Query 160284 TATTTGTACATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCAC 160343 || |||| || |||| | || ||||| ||||||||||| || | ||||||||||| Sbjct 31199 TACTTGTCGCTCTGGGGCATAGCGCCGGGCACGCCGGGCATGCGGTTGAGGGTGGCCCAG 31140 Query 160344 AGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACT-CTCCGATTAACCT 160402 | || || || |||||||| |||||||| | ||| || | ||||| || | | Sbjct 31139 ACATGCTCATCAGGGCTGTAGGTGTCCTTGGCCCACTCGAGGAACTGCTGAGCTGTGGGG 31080 Query 160403 GTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAA 160462 || || || | ||| ||| ||| | ||| || |||| ||| || |||| | ||| Sbjct 31079 TTCTCGAAG-ATGTGCTGCACGAAGGCCCGGGTAACCACAATGTATGCATTGCCTGTGAA 31021 Query 160463 TAT-CGGTATGGGTATAGGCGGCGTGTCTTTGTC-CTGACCG-GTGTTAGACACCACTCC 160519 || |||| || ||||||| ||| || ||| | | || ||| | Sbjct 31020 CATGGGGTAGTTGT-GCGGCGGCGGCAGTTTCTCTCTGGCAGTCCGTGAGATA-----AA 30967 Query 160520 TTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGT-TCCG 160578 | || ||| |||| | | || ||| | | |||| | ||| | || | || | Sbjct 30966 TGTCCCCACTTCGTGGTGGTACTGCCAGCGCTGCCGCTTGAGGGGT-GAGGGCTTCTCTG 30908 Query 160579 TCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCT 160638 ||| | ||||| || | ||| ||||| || |||||| ||| |||| Sbjct 30907 ACTCCATGCTGTTCCGCCCCTGCAGCACCTTCAGGGCACGGATGATCTCGGCGTTGGTCT 30848 Query 160639 TGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCG---CTCAGGT 160695 ||| || ||||| || ||||| ||| | ||||| |||| | || ||| | Sbjct 30847 TGATGGGGAAGTCTGTGCCGCAGGTGTTGAGGACGTAGCGCCATGGCACGGGACTCCG-- 30790 Query 160696 CGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTA 160755 ||||||| |||||| || | || || |||| ||| |||||| || || || | Sbjct 30789 -CAACAGGTCCTGCATGCAGTTGAGGTCAGCTTGCAGCCGGGACCAGGAGGCATAGACCA 30731 Query 160756 CGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCG 160815 | || || || | || ||||||||||| || ||| || | |||||| || || | Sbjct 30730 CATTTTCCAGGTGGCTAGCCACAAAGACATTGGGGAAGCAGGCCACGATGGCCTGTACAG 30671 Query 160816 CCAGAAAGAACATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCG 160875 || ||| | | ||| | ||| | ||| ||||| || | |||||| || | Sbjct 30670 CCTCCTTGAAAGTGGCCGGAGACTTGCTGTCAATGTGGACGCAGTAGATGTTCTGGGGGG 30611 Query 160876 CGTAGATGGCCCTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGT 160935 | |||| || || || | || |||||||||||| || || | ||||| || || |||| Sbjct 30610 CATAGAGGGACCGCAGGAGCCGCTCGAACATCTCGATTTTGTTGTGGATGACCATGGAGT 30551 Query 160936 AGGCTATCGGAAACTCGGTCTCCTCGCGACTCAG 160969 |||| || || ||||| |||||| | ||||| Sbjct 30550 AGGCGATGGGGAACTCCACCTCCTCCTGGCTCAG 30517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577168541799960