Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq578 105 2e-17 >seq578 Length=225006 Score = 105 bits (116), Expect = 2e-17 Identities = 145/200 (73%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 302620 GTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCT 302679 || || ||||| || || || ||||| |||| |||||||| || |||||||| | |||| Sbjct 153728 GTCTTGACAGCGGTGTCGATGAGACCCTCACGCCCACCCATGGCGTGGAAGAAGAACTCT 153787 Query 302680 TCCGGTCGT-AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATC 302738 || ||| || || | | | ||| |||| ||||| || || |||||| || Sbjct 153788 GTGGG-CGTCAGGCCGGCCAGGTACGAGTTCTCCACGAAGCCCCGGCTCTCGGGGCCATA 153846 Query 302739 GTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCC 302798 |||| |||| | ||||| ||||| |||| || || |||| | ||||| ||||| || Sbjct 153847 GTCGTCCTTGATGAAGTGGGGCAGCGTCCGGTGCTTGAAGCCAAAGGGGATGCGCTTGCC 153906 Query 302799 ATCAACGTTCTGCTGTCCCA 302818 || |||||||||||||||| Sbjct 153907 CTCCACGTTCTGCTGTCCCA 153926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471685200348077