Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq878 127 2e-23 seq940 96.9 3e-14 seq688 91.5 1e-12 >seq878 Length=2428478 Score = 127 bits (140), Expect = 2e-23 Identities = 674/1063 (63%), Gaps = 24/1063 (2%) Strand=Plus/Minus Query 281426 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 281485 ||| | ||||| || |||||||||||||| | ||||| ||||| ||||| || ||||| Sbjct 1881696 GCACTGACATTCAGGATACCATTGGCATCGATGTCAAAAGTGACCTCAATCTGGGGGACT 1881637 Query 281486 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 281545 || | | || || || || || || | || | ||||| || || || ||| Sbjct 1881636 CCACGGGGTGCTGGGGGAATGCCCGTTAAGTCGAACTTGCCCAGCAAGTTGTTGTCCTTA 1881577 Query 281546 GTGAATTTTCGTTCACCCTCGAAAATTTGGAT-AGTA-ACTACAGTTTGATTATCTGAAT 281603 || | || ||||||||| | | |||| || | ||| | | || || || || | Sbjct 1881576 GTCATAGCTCTCTCACCCTCGTACACCTGGACCAGGACACTGC--TCTGGTTGTCCGAGT 1881519 Query 281604 AAGTTGTAAATACTCTGGATTT-TTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG 281662 | || || || |||| ||| ||| ||||| || ||||| | | || | | | Sbjct 1881518 AGGTGGTGAAGG-TCTGAGTTTGTTTGGTGGGAATAGTGGTGTTGCGCTTGATGAGAGCG 1881460 Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| || || | || || || ||||| |||||||| | || | Sbjct 1881459 GTCATCACTCCACCAGCCGTCTCAATGCCCAGGGACAGAGGGGTGACATCCAACAGCAGC 1881400 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || || | || ||| | | || | |||||||||||||| | |||||| ||| Sbjct 1881399 AGATCCTGCACATTCTCAGACTTGTCTCCCATGAGAATAGCTGCTTGCACAGCAGCGCCA 1881340 Query 281783 TATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTT 281842 || |||||||||||||| || || | | | || || | ||| |||||||| || | Sbjct 1881339 TAAGCAACAGCTTCATCGGGGTTGATGCTCTTGTTGAGCTCTTTGCCATTGAAGAAGTCC 1881280 Query 281843 GAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGC 281902 || || | | | ||| || ||||| | || || || || | ||||| || || Sbjct 1881279 TGTAGCAGCTTTTGGATCTTGGGGATACGGGTAGAGCCACCCACCAGCACAATCTCCTGT 1881220 Query 281903 ACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT 281962 | ||| || || || || | ||| | | | || || || || || || | Sbjct 1881219 ATCTGACCCTTGTCAAGCTTGGCATCACGCAGAGCCTTCTCCACAGGCTCCAGGGTGCCA 1881160 Query 281963 CTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACAT-TATAA-T 282020 | || | || | | || || ||||| || | ||| || || | || || | Sbjct 1881159 CGGAAAAGATCAGCATTGAGCTCCTCGAAGCGGGCACGAGT--GATGGAGGTGTAGAAGT 1881102 Query 282021 CAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 282080 |||| || ||| | | ||||||| ||||| ||| ||| || ||||| || | | Sbjct 1881101 CAATGCCCTCGTAGAGGGAATCAATCTCAATGCTAGCTTGTGTGGAAGAGCTGAGGGTGC 1881042 Query 282081 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG--ATTCAA 282138 | || || | ||||| || || | || | | | || | ||| ||| | | Sbjct 1881041 GCTTTGCCCTCTCACAAGCCGTACGCAGCCGCCTCACTGC--TCGCTTGTTGCCAGCAAT 1880984 Query 282139 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCA 282196 || ||| | || | |||||| ||||| |||| ||| | || | || || ||| Sbjct 1880983 GTCGCGTTTGTGCTTACGCTTGAATTCTTC--CACAAAATGGTTCACCATGCGGTTGTCA 1880926 Query 282197 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 282256 || || || || |||| | || | || | || | | || | || | |||||| Sbjct 1880925 AAGTCCTCCCCACCCAGGTGGGTGTCACCAGCTGTGGACTTCACCTCAAAGATTCCATCC 1880866 Query 282257 TCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 282316 |||| | | || | |||||| || || ||||||| ||||| || || |||||| Sbjct 1880865 TCAATGGTAAGAATGGACACATCAAAAGTACCCCCACCCAAGTCAAAGATGAGAACATTC 1880806 Query 282317 ATTTCTTTGTCTTGG------TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 | ||| | || || || || | ||||| || | |||||| || || || Sbjct 1880805 TTCTCTCCAGCCCGGGTACCTTTCTTGTCCAAGCCATAGGCTATAGCAGCTGCTGTGGGC 1880746 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| ||||| | || |||||||| |||| || | || |||||||| || || || Sbjct 1880745 TCATTGATAATACGCATCACATTAAGGCCAGTGATGGTGCCAGCATCTTTGGTAGCCTGG 1880686 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 | || || || || || || ||||| || || || || |||| Sbjct 1880685 CGCTGGGAGTCATTGAAGTAAGCAGGCACTGTGATGACAGCAT 1880643 >seq940 Length=5565825 Score = 96.9 bits (106), Expect = 3e-14 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 131176 TGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTAT 131235 ||| || || ||| | || ||||| ||||| || |||||| | ||| | | | ||||| Sbjct 782899 TGTTGTGGCTACAGTGGCGTTTGGAATGGGCATCAATAAAGCAGATATCCGGATGGTTAT 782958 Query 131236 TCATTACGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCG 131295 |||||| || || || ||| | || ||| ||||||||||||||||| ||||| ||||| Sbjct 782959 TCATTATGGTGCCCCTAAGGAAATGGAATCCTATTATCAAGAAATTGGGAGAGCTGGTCG 783018 Query 131296 TGATGG 131301 |||||| Sbjct 783019 TGATGG 783024 >seq688 Length=1735070 Score = 91.5 bits (100), Expect = 1e-12 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||||| |||||||||||||| | |||| |||||| || || ||||| || |||| Sbjct 652154 CAAAAACCGTATTGGTTGGATTCATTGCAACTTGATTCTTTGCAGCATCGCCGATCAACC 652213 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 || || ||||| || | ||| || ||| || || || || || || ||||| |||| Sbjct 652214 TCTCAGTATCTGTGAAGGCAACGTAGCTTGGCGTGGTCCGGTTGCCCTGGTCATTGGCAA 652273 Query 282810 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 282869 | ||||| || || || | || | || || ||||| | | || || || | ||||| Sbjct 652274 TGATTTCCACCTTCCCGTGCTGGAAGACGCCAACACAGGAATAGGTGGTGCCAAGATCAA 652333 Query 282870 TACCAATAGC 282879 | |||| ||| Sbjct 652334 TTCCAACAGC 652343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740285698570746