Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq958 104 2e-17 seq745 104 2e-17 seq319 95.1 1e-14 >seq958 Length=4449282 Score = 104 bits (114), Expect = 2e-17 Identities = 117/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 ||||||| ||||| || || ||| | || ||||| || ||| ||||||||| ||| Sbjct 4058142 TGATGGCTTTGCCTCCATGCCATGCCCTTTGCCAGTTCTATGTTCTAAATGGTGAATTGT 4058201 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || ||| | ||||| || || || || ||||||||||| || || || || || || | Sbjct 4058202 CTTGCCAACTCTATCAGAGGTCCGGAGATATGGGACTAGGAGTGCCTTTCAATATTGCCA 4058261 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACACGTTAC 41203 | ||| | |||||||| || |||||||| || || || Sbjct 4058262 GCTATTCACTGCTCACATACATGATTGCCCATGTCAC 4058298 >seq745 Length=18327016 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 43914 AAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATA 43973 ||||||| ||| | ||||||| || ||||| ||||| || || || || || ||||||| Sbjct 16055728 AAGAAGTACAAATTACAGAAGCTCGCTGTTTCTATGGCTTCCAGATCGCAATGGAAAATA 16055787 Query 43974 TTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 | ||||| ||||||||||||||||| || || || ||||| |||||| Sbjct 16055788 TACATTCAGAAATGTACAGTCTTCTTATTGACACCTACATTAAAGAT 16055834 Score = 102 bits (112), Expect = 6e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 ||||| || | || || ||||||| |||||||| || |||||||| || || ||||| Sbjct 16058211 GGAGAGCGTGTAGTAGCTTTTGCAGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 16058270 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | || |||||| | |||||| |||| || |||||||| | || ||||||||||| || Sbjct 16058271 TCAATTTTTTGGCTGAAGAAAAGAGGATTAATGCCTGGACTCACTTTTTCAAATGAACTA 16058330 Query 44243 ATAAGTCGTGATGA 44256 || ||| | ||||| Sbjct 16058331 ATCAGTAGAGATGA 16058344 >seq319 Length=11147124 Score = 95.1 bits (104), Expect = 1e-14 Identities = 103/136 (76%), Gaps = 3/136 (2%) Strand=Plus/Plus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 ||||||| |||||||| ||||| |||||||| ||||||| |||||||| || ||||| | Sbjct 5784524 AAAACCCTTTTGATTTCATGGAGAATATTTCTCTGGAAGGAAAAACAAATTTCTTTGAGA 5784583 Query 44553 AACGCGTTGGAGAATATCAGCGAATGGGCGTCATG---ATAACAAGTGACAATAAATTTA 44609 | || ||| |||||||||||| | | || ||| ||||| |||||| || | Sbjct 5784584 AGCGGGTTTCAGAATATCAGCGTTTTGCTGTTATGGCAGAAACAATGGACAATGTCTTCA 5784643 Query 44610 CTACGGATGAAGATTT 44625 || ||||| |||||| Sbjct 5784644 CTCTGGATGCAGATTT 5784659 Score = 89.7 bits (98), Expect = 4e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 43928 CCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATG 43987 ||||||||||| ||||| ||||| ||||| ||| ||| || || |||| || || ||| Sbjct 5775808 CCAGAAGCACGTTGTTTCTATGGCTTTCAGATTCTCATTGAGAACGTTCACTCAGAGATG 5775867 Query 43988 TACAGTCTTCTGATAGATACGTACATCAAAGA 44019 ||||| || |||||||| || ||||||||||| Sbjct 5775868 TACAGCCTGCTGATAGACACCTACATCAAAGA 5775899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397421990311105