Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq592 86.0 7e-12 seq319 86.0 7e-12 seq470 82.4 8e-11 >seq592 Length=6360184 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 |||||||| || |||| ||| ||||||||||| |||||| ||| | ||||| || || Sbjct 3978688 GTGAAAATATAGCGAGGGCTGGCAGCATCCTTCCCACCATGAAGCCTGGTACCAAACTGA 3978747 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 ||| | || | | || || | ||||| || |||||||| ||||||||||||||| Sbjct 3978748 CCAATAGGTTGTAGCAGATTAACATTGTTACTTCCAACAAAGTTCTGAGCCAAGTTGACA 3978807 Query 117425 ATCGT 117429 || || Sbjct 3978808 ATAGT 3978812 >seq319 Length=11147124 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 ||||||||||| || | |||||| || || | || |||||||| || || | |||||| Sbjct 5779560 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 5779501 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 | |||||| || ||| |||||||| |||||||||||||| || |||||||| Sbjct 5779500 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGCA 5779441 Query 74892 AC 74893 || Sbjct 5779440 AC 5779439 >seq470 Length=1115040 Score = 82.4 bits (90), Expect = 8e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 |||| ||||||||||| | ||||| | || || ||||| ||||| || ||||||| Sbjct 519034 GCGTAAAGATGTATCGAGGACTGGCAGAGTCTTTCCCACCATGCAGCCTTGTGCCAAACT 518975 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATT 152144 | ||| |||| || | ||||||||||||| |||||| || |||||||| || || Sbjct 518974 GACCAATAGGCTGTAGCAAGTTGAGGTTGTTGCTGCCCACAAAGTTCTGAGCTAAGTT 518917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547167974955800