Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq840 260 2e-64 seq783 105 9e-18 >seq840 Length=2221924 Score = 260 bits (288), Expect = 2e-64 Identities = 626/935 (67%), Gaps = 28/935 (3%) Strand=Plus/Plus Query 13671 CCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTGATCCACCACAAG 13730 || ||||||| ||| ||||| ||||| |||||||||||||| || || |||||| |||| Sbjct 30514 CCGCTGAGCCAGGAGGAGGTGGAGTTCCCCATCGCCTACTCCATGGTCATCCACAACAAA 30573 Query 13731 ATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTC 13790 ||||||||||||||||| |||||| || || |||| ||||| |||||| ||||||||||| Sbjct 30574 ATCGAGATGTTCGAGCGGCTCCTGCGGTCCCTCTATGCCCCCCAGAACATCTACTGCGTC 30633 Query 13791 CACGTGGACTCCAAG--TCCGGCGACGAGTTCATCCGGGGCGTCTCGGCCATCGCCAGGT 13848 ||| | ||| |||| |||||| || |||| || || |||||||| | Sbjct 30634 CACATTGACAGCAAGTCTCCGGCCAC--TTTCAAGGAGGCTGTACAGGCCATCGTGGCCT 30691 Query 13849 GCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACGGCTCCTGGAGTC 13908 ||||||| || || |||| || ||| | | ||||| || | ||||||| | Sbjct 30692 GCTTCCCCAATGTCTTTGTGGCTAGCCACCTGGAAAATGTGGTCTATGCCTCCTGGTCCC 30751 Query 13909 GCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTG--GACGCCTCCCCCGTCAAGTGGAG 13966 | |||| || ||||||| ||||||| ||||||| | | |||| | || ||| | Sbjct 30752 GGCTGCAAGCTGACCTCAACTGCATGCAGGACCTGTTGCGGAGTCCCGTGCCA--TGGCG 30809 Query 13967 GTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCG 14026 ||| | |||||| ||||| | |||||||| ||||||||||| |||||| | || Sbjct 30810 CTACGTCCTCAACACCTGCGGCACAGACTTCCCCATCAAGACCAACGCCGAGATCATCCG 30869 Query 14027 GGCGCTGAAGGCCCTGGGCGGCAAGAACGCCCTGGAG--AGCGAGGGCATGCCCAACCAC 14084 || ||||||| ||| || |||| | ||||| || || | | | || || | Sbjct 30870 TGCCCTGAAGGTGCTGCAGGGGCGGAACAGCATGGAGTCAGAGAAGCCCTCACC--CCTC 30927 Query 14085 AAGCTGCACCGCATCAGGAAGAGGCACGTGGTGGCCAGCGGCGGCGTGGTGGTCA-ACAC 14143 |||| ||| || | || || ||| | || || | | | ||| || Sbjct 30928 AAGCGGCAGCG---CTGGCAGTACCACCACG----AAGTGGGGACATTTATCTCACGGAC 30980 Query 14144 CGGCAGGAACAAGGCCCCGCCGCCGCTCAGGATCCCCATCTTTGCGGGAAACGCTTACTT 14203 | ||| | || |||||||||| || |||||| || | || || || ||| | Sbjct 30981 TGCCAGAGAGAAACTGCCGCCGCCGCACAACTACCCCATGTTCACAGGCAATGCATACAT 31040 Query 14204 TGCGGTCACCCGGGAGTTCGTGGACTTCGTCCTCAAGGACGAGCCGGTGGCCCTGC---T 14260 || ||| ||||||| |||||| | | || || || || || || | || | Sbjct 31041 TGTGGTTACCCGGGCCTTCGTGCAGCACATCTTCGAGAAC---CCCACAGCTCAGCAGTT 31097 Query 14261 CATGCACTGGTTCGAGGACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAG 14320 | | | ||| | ||||||| |||||||| || ||||| | ||||||||| | | | Sbjct 31098 CCTCGAGTGGGCCAAGGACACCTACAGCCCTGATGAGCATGTCTGGGCCACCCTCAACCG 31157 Query 14321 AATGTACGGGACGCCCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTG 14380 ||| ||| |||||| | || ||| || ||||||| | |||||||||| Sbjct 31158 CATGCCCGGCGTGCCCGGCGCTATGCCCCAGAGCGACAAGTACCAGCTCTCGGACATGAA 31217 Query 14381 GGCCAAGGTCAGGTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCT 14440 ||| | | | | ||||||||||| ||| ||||| || | || || || || | Sbjct 31218 TGCCCTGCCCCGCCTGGTCAAGTGGCAGTACCTAGAGGGTGACACCAGCAAGGGTGCACC 31277 Query 14441 GTACCCGCCTTGCGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGT 14500 |||||||| ||| |||| ||| | |||| |||| ||| |||| |||||||| Sbjct 31278 CTACCCGCCCTGCACCGGCCAGCACCAGCGCGCCGTCTGTGTCTACGGGGTGGGCGACGT 31337 Query 14501 GAAGTGGCTG-AAGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGACGACGAGACGGACG 14559 | ||| || | ||| | | ||||| || ||||||||||||||| | | ||||| Sbjct 31338 GTCCTGGGTGCTACAGCAGCAC-CACCTCTTGGCCAACAAGTTCGACCCCATGGTGGACG 31396 Query 14560 AGTTCGCCGTGCGCTGTCTGGACGAGGACGTGCGC 14594 | |||| | ||||| || ||| || ||||| Sbjct 31397 ATGCCGCCATCATGTGTCTCGAGGAGCACCTGCGC 31431 >seq783 Length=743739 Score = 105 bits (116), Expect = 9e-18 Identities = 249/369 (67%), Gaps = 18/369 (5%) Strand=Plus/Minus Query 13695 TTTCCCATCGCCTACTCGATCGTGATCCACCACAA---GATCGAGATGTTCGAGCGCCTC 13751 || |||||||||||| || ||| | ||||| | | |||| |||||| | || Sbjct 675805 TTCCCCATCGCCTACG---TCATGACCTTGCACAAAGAGTTTGAGACCTTCGAGAGGCTA 675749 Query 13752 CTGAGGGCCATCTACGCCCCGCAGAACCTCTACTGCGTCCACGTGGACTCCAAGTC--CG 13809 | || || | ||| || || ||| |||||||| |||| |||||| ||||| | || Sbjct 675748 TTCAGAGCGGTTTACATGCCCCAAAACATCTACTGCATCCATGTGGACGCCAAGGCACCG 675689 Query 13810 GCGACGAGTTCATCCGG--GGCGTCTCGGCCATCGCC-AGGTGCTTCCCTAACGTGGCCC 13866 || | | || || |||| |||| || || |||||||| |||| || Sbjct 675688 GCCTC-----CTTCTGGCAGGCGGTGCGGCGCCTGCTGAGCTGCTTCCCCAACGCCTTCC 675634 Query 13867 TGGCCCACCGG-CTGCACGACGTGGTGTACGGCTCCTGGAGTCGCGTGCAGGCCGACCTC 13925 | ||| |||| | | || ||||| ||||| | ||| ||| ||| |||||| Sbjct 675633 TCGCCTCCCGGTCAGAGCGG-GTGGTCTACGGAGGCATCTCCCGCCTGCGGGCTGACCTC 675575 Query 13926 AGCTGCATGTCGGACCTGGACGCCTCCCCCGTCAAGTGGAGGTACCTGCTCAACCTGTGC 13985 ||||||| |||||| ||||| |||| ||| | |||||||||||| ||| Sbjct 675574 CACTGCATGAGAGACCTGCTGGCCTCGGCCGTGCCCTGGCGCTACCTGCTCAACACCTGC 675515 Query 13986 GGGATGGACTTCCCGCTCAAGACCAACCTGGAGATCGTGCGGGCGCTGAAGGCCCTGGGC 14045 || ||||||||| | |||||||||| |||||| || ||| |||||||| ||| || Sbjct 675514 GGCCAGGACTTCCCCTTGAAGACCAACCGGGAGATTGTCCGGTGGCTGAAGGGCCTCGGG 675455 Query 14046 GGCAAGAAC 14054 || |||||| Sbjct 675454 GGGAAGAAC 675446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658681387400960