Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq958 86.0 6e-12 >seq958 Length=4449282 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 34302 CCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTC 34361 |||| |||||||| | || |||||||| ||||| ||| | || || || || || | Sbjct 4054346 CCAAAGAGCTCTCTGCAAAAGGTGTGAAGATTTGGGATGCTAATGGATCACGTGAGTTCC 4054405 Query 34362 TGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCC 34421 |||| |||| || || | | |||||||| || ||||| || || || ||||||| Sbjct 4054406 TGGATAAGCAAGGTTTTAGCACCAGAGAGGAGGGGGATTTGGGACCAGTTTATGGGTTCC 4054465 Query 34422 AGTGGAGACACTTTGGGGCGGAGTA 34446 ||||||| |||||||| || || || Sbjct 4054466 AGTGGAGGCACTTTGGAGCAGAATA 4054490 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || || |||||||| |||||||||||||| || || || ||||| || |||||||| Sbjct 4054490 TATTCTGCTCCAAAGTGCCTCCACTGGAACCCATAAACTGGTCCCAAATCCCCCTCCTCT 4054431 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | || || |||| ||||| || || || || || | ||| ||||| |||||| Sbjct 4054430 CTGGTGCTAAAACCTTGCTTATCCAGGAACTCACGTGATCCATTAGCATCCCAAATCTTC 4054371 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGG 7043 || || | |||||||| |||| Sbjct 4054370 ACACCTTTTGCAGAGAGCTCTTTGG 4054346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448223059371120