Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq557 107 2e-18 seq958 93.3 3e-14 >seq557 Length=906486 Score = 107 bits (118), Expect = 2e-18 Identities = 101/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 3256 GCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGAGTTTGGTGGTGT 3315 |||||||||||||||||| |||||||| | ||||| || ||||| ||||| || || || Sbjct 617448 GCTCTTCCGAGATGGGGTTAACTGGGGCAGGATTGTGGCCTTCTTCGAGTTCGGCGGCGT 617507 Query 3316 TATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAACATTGCCGCGTG 3375 ||||| ||||| || ||||| || | || | ||||||| |||| ||| || || || Sbjct 617508 GATGTGCGTGGAGAGTGTCAACAGGGAGATGTCTCCCCTCGTAGACAGCATCGCTGCCTG 617567 Query 3376 GATGACAGA 3384 |||||| || Sbjct 617568 GATGACCGA 617576 >seq958 Length=4449282 Score = 93.3 bits (102), Expect = 3e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 118534 AGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGA 118593 || ||||| | || |||||||||||||| | || |||||||| | ||| ||||| Sbjct 4058304 AGTCCTGTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGC 4058245 Query 118594 ACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCA 118653 || || || ||||| ||| | || ||||| || | ||||||||| | || || ||| | Sbjct 4058244 ACTCCTAGTCCCATATCTCCGGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGA 4058185 Query 118654 ACATAAAACTGACTTATGATGTGACATGGAGGCAGAACCAT 118694 ||||| ||||| | | | || |||||||||| | |||| Sbjct 4058184 ACATAGAACTGGCAAAGGGCATGGCATGGAGGCAAAGCCAT 4058144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414441333867844