Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq339 107 1e-18 >seq339 Length=1012135 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || ||||| || || ||||| ||||| || |||||||| || Sbjct 49712 AAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCCTGGAAGTTGAGCCC 49771 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| |||| | | || || || ||||| ||||| | || || ||| Sbjct 49772 AGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTGAT 49831 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || ||||| ||||| || |||||||| | |||||| | || ||| Sbjct 49832 CAGCAGAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACTAC 49891 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| || || || ||||| | ||| |||| Sbjct 49892 AACATCCAGAAGGAATCCACCCTGCATCTAGT 49923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337980677046668