Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq745 111 2e-19 seq213 111 2e-19 seq319 93.3 6e-14 >seq745 Length=18327016 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 ||||||||||| |||| ||| || ||||| ||||| || ||||||| ||| | ||| || Sbjct 16058344 TCATCTCTACTGATTAGTTCATTTGAAAAAGTGAGTCCAGGCATTAATCCTCTTTTCTTC 16058285 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 |||||||| |||| || ||||| ||||||||||| || ||||| || || ||||| || Sbjct 16058284 AGCCAAAAAATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAAGC 16058226 Score = 104 bits (114), Expect = 3e-17 Identities = 89/110 (81%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||||||||||||| | ||||||||||| || | ||||| || ||||| || |||||| Sbjct 16059622 GACATAACTCCCATTCTCTGATATTCACCTACTCTCTTCTCAAAGAAATTGGTCTTGCCT 16059563 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAT 47944 |||| || || |||||||| || ||||| ||||| |||| || ||||| Sbjct 16059562 TCCAGAGAGATGTTTTCCATGAAGTCAAAAGGATTCTCTGCTTTGTAAAT 16059513 >seq213 Length=2372662 Score = 111 bits (122), Expect = 2e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || |||||||| ||||| || || || ||||| |||||||| ||||||| || |||||| Sbjct 2156366 GTACCTGCATTGAATAACGTGGGGGAGGCATGGGTAAACCACCTTTCAGAGAGAAGATTG 2156307 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 || |||||||| || | || ||||| || || || || |||| ||| | ||||||| Sbjct 2156306 TAGGTTTCAATTGCAGCATCAATGTCATTTTTGTGGATCCCCACCGATACTCTCATCAAC 2156247 Query 78519 ATATGCTGAGG 78529 ||||||||||| Sbjct 2156246 ATATGCTGAGG 2156236 Score = 105 bits (116), Expect = 9e-18 Identities = 115/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 78002 AACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATG 78061 |||||| ||||| ||||||||||| ||||| || |||| || || |||| || || || Sbjct 2158621 AACTCGCTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTG 2158562 Query 78062 TTCTTCATTTCCTGTATTCTT-TTTAAGATCGAGAAACTCCATAATATCAGAATGCCATG 78120 ||||| || || || ||||| |||||| || |||||||| | ||||| ||||||||| Sbjct 2158561 CTCTTCTTTCCCAGTGTTCTTCTTTAAG-TCAAGAAACTCAAAGATATCCAAATGCCATG 2158503 Query 78121 GTTCTAGATATATTGCCATAACTCCAGGTC 78150 | || || || || || | | | ||||||| Sbjct 2158502 GCTCCAGGTAGATGGCAAAAGCCCCAGGTC 2158473 Score = 96.9 bits (106), Expect = 5e-15 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||| ||||| || | ||||| || ||||| || |||||||| || || || | ||| Sbjct 2165055 TGAAACTCTCCTGAGAGGACTCTGCGTGTGTAGATGTTACTGGTGTAGGGCTCAATGGAT 2164996 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 || ||||| ||||| || |||||||| |||||||||||||| || | | | | || Sbjct 2164995 TCGTTGTTGCCCAAGATCTGAGCAGTGGAAGCAGTTGGCATGGGAGAAAGGAGAAGGCTG 2164936 Query 77247 TTTCTGAGACCAT 77259 ||||||| ||||| Sbjct 2164935 TTTCTGACACCAT 2164923 >seq319 Length=11147124 Score = 93.3 bits (102), Expect = 6e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || || || || || || ||||| || || | ||| || Sbjct 5779560 TCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGGCCCCTTTTCTTC 5779501 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||||||||| || || || || || |||||||| |||||||| || || ||||| || Sbjct 5779500 AGCCAAAATATAGCAGCAAAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAGGC 5779442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694607834129440