Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq339 93.3 4e-14 >seq339 Length=1012135 Score = 93.3 bits (102), Expect = 4e-14 Identities = 161/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 111095 TAAAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAAC 111154 |||||||||| || || || || || |||| ||||||||||| ||| ||||| || | Sbjct 49710 TAAAAATGCAGATCTTCGTGAAGACCCTGACTGGCAAAACCATCACCCTGGAAGTTGAGC 49769 Query 111155 CCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCG 111214 |||| || | ||| | || || || || ||||| |||||| ||||| | Sbjct 49770 CCAGTGACACCATTGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCTG 49829 Query 111215 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 111274 |||| || || || || | ||| ||||| || |||||||| || | | || | Sbjct 49830 ATCAGCAGAGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGACGCACGCTCTCTGACT 49889 Query 111275 ATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111328 | || || || || ||||| || || ||| ||||| |||| ||| | ||||||| Sbjct 49890 ACAACATCCAGAAGGAATCCACCCTGCATCTAGTGCTGCGCCTGAGGGGTGGCA 49943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421775106274696