Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Falco_20peregrinus_20[refseq_20GCF_5F000337955.1_202013-02-05] 7,021 sequences; 1,171,973,431 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq885 161 1e-34 seq346 102 1e-16 >seq885 Length=3342068 Score = 161 bits (178), Expect = 1e-34 Identities = 181/242 (75%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303 ||||||| ||| || |||||||| ||||| ||| ||| |||||||| || |||||||| Sbjct 3023381 ATGAGTCTAGTAGTTTGGAACAGCTGCTCATCATCCCACTCTGGATGCTCCTGTTTCAGG 3023322 Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363 | || || |||| |||||||||||| ||||| || || || |||||||| | || || Sbjct 3023321 ATGTCACAGACCCGGTTGTGTTCCCTCAGCCATATTGTAGCATACATCATCAAGCCCGGG 3023262 Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423 |||| ||||| |||| || || |||| | ||| || ||| || || | ||||| Sbjct 3023261 ACCAAACCAAACACCTCCTGCCCAACAGAAAACTGCAAGTGTTCAGGTACGTGAGGAGGG 3023202 Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483 |||||||| | |||| ||| || || | || ||||||||||| || ||||||||| Sbjct 3023201 TAGATCATCTCTGCCTGAGTGTCCTTCACTGTTGGTGGATACATTTCTCCATCAATCATC 3023142 Query 9484 TG 9485 || Sbjct 3023141 TG 3023140 Score = 143 bits (158), Expect = 4e-29 Identities = 221/314 (70%), Gaps = 1/314 (0%) Strand=Plus/Minus Query 8289 GGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGC 8348 |||| || | || || || || || |||||| | |||| || ||| | | || Sbjct 3025351 GGAAAGCAGTGAAAGGGCAGCCTTTCACGTTGTTGCAGATGAGCTTCTGTAAGGAGGCAG 3025292 Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408 | |||| || |||| ||||| | || ||||||||||| || ||||||||| | |||| Sbjct 3025291 TATTGATTATTTCGAAGCCCACTTTCCCACCGAAGGTGCTAGGTTTCCAGTACTCAGGGG 3025232 Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468 ||||||| | || |||| || ||||| || ||||| || || || | ||| | || Sbjct 3025231 AGCAGATAGCATTTCCCATCAGTCCTTTCAGAGAGAATGGTGCTCCGATCTCCACCATTG 3025172 Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528 | |||||||||||||| || || |||||||| || | | || | ||||||||||| Sbjct 3025171 TTTCACCGAAGATGGCACCTGGTCGTGGCTTTTCTACGAGAAGACCTGGGTACAGCTCCA 3025112 Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT-T 8587 ||| || | |||||| ||||| | ||||| || || || || ||||||||| | Sbjct 3025111 TAGCATCAATGTCTCCATAAAGCTCTTCCAGTTCAGCTGCCATTTCTTTTTCTCCTATAA 3025052 Query 8588 TTATTAATAAAAAA 8601 ||||| || || || Sbjct 3025051 TTATTGATGAATAA 3025038 >seq346 Length=9772987 Score = 102 bits (112), Expect = 1e-16 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 8373 CTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGC 8432 ||||||| || || ||||| ||||||||| | |||||||||||| ||| | | || | Sbjct 303368 CTCCGCCAAATGTACTGGGTTTCCAGTACTCTGGGGAGCAGATGGGGTTTCCAAGAAGCC 303427 Query 8433 CTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGAC 8492 | || ||||| |||||||| || | ||| | ||||| || || || || | ||||| Sbjct 303428 CCTTCAGGGAAAACGGAGCTCCAATCTCCACCATGCTTTCCCCAAAAATACCATTGGGTT 303487 Query 8493 GGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGG 8552 |||| || || | || || || | || | ||||| ||| || | ||||||||| || Sbjct 303488 GGGGTTTCTCAAGCAGTAAGCCTGGATAGAACTCCAGAGCATCAATGTCTCCGTACAGCT 303547 Query 8553 CCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 | || || || || |||| | |||||||| Sbjct 303548 CTTCCAGCTCTGCTGCATTCTCTTCCTCTCCTGT 303581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716813885099840