Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 7e-12 >seq8 Length=115844353 Score = 86.0 bits (94), Expect = 7e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| || || || | ||| ||||| || ||||| | ||| ||||| ||||||||| Sbjct 101497728 ATGTAGGTGTCAATAAGAAGACTGTACATCTCTGAATGTATATTTTCCATGGCAATTTGG 101497669 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGA 93463 || || |||||||| | |||||| ||||| || ||||||||| Sbjct 101497668 AAGCCATAGAAACAACGAGCTTCTGTGATTTGTACTTCTTGA 101497627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556711644834720