Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 >seq1 Length=120002344 Score = 102 bits (112), Expect = 8e-17 Identities = 104/133 (78%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 ||||||| | ||| ||||| | |||||||||| || |||||||| || ||||||| Sbjct 636487 ACGGTGTCAGGAACAGCCTGCTCATTTCCCCCATGCCAACAGCCTCCACTGCCCAGATCC 636546 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC-GGGTGCTC 95196 | |||||||||||||| |||| |||| |||| |||| | ||| ||| || |||||||| Sbjct 636547 TGGGCAACAACGAGTCCATCGAGCCCTACACCAGCAACATCTAC-ACACGCAGGGTGCTC 636605 Query 95197 GCCGGGGAATTCC 95209 | ||||| |||| Sbjct 636606 TCGGGGGAGTTCC 636618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494590688390880