Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1 104 4e-17 >seq1 Length=120002344 Score = 104 bits (114), Expect = 4e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 ||| || || | ||||||| | ||||| | |||||| || || ||||| ||||| Sbjct 639825 CCAGCCATAGAAGTGCATGCTGGTGAGTTTCCCATAGTTGGGCTCCGCAATGTGGATGTT 639766 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTT 204036 ||| |||||||| ||||||||||| | | | | ||||| ||||| || | ||||| || Sbjct 639765 CAGGGACTGGCTCTGGTCGATGAAGGCCCCTCTGTCTGCAGCCATCTTCAGGATGGTTTT 639706 Query 204037 CTGCGAAATCTCCCACACCGTCTTG 204061 ||| || ||||||||||| |||||| Sbjct 639705 CTGGGAGATCTCCCACACGGTCTTG 639681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794942217679680