Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq35 86.0 5e-11 >seq35 Length=8009359 Score = 86.0 bits (94), Expect = 5e-11 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 517250 TTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATT 517309 ||||| | |||| |||||| || || ||||||||||| | |||||| ||||| || || Sbjct 3769687 TTATCCACAGCAGACACATTCAGGATGCCATTGGCATCGATATCAAAGGTGACCTCGATC 3769746 Query 517310 TGAGGGACCCCTCTCTGAGCAGGTGGGATCCC 517341 |||||||||||||| ||||||| || || || Sbjct 3769747 TGAGGGACCCCTCTGGGAGCAGGGGGAATGCC 3769778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779759072056168