Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ficedula_20albicollis_20[refseq_20GCF_5F000247815.1_202013-06-27] 21,428 sequences; 1,118,343,587 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq8 114 1e-20 >seq8 Length=115844353 Score = 114 bits (126), Expect = 1e-20 Identities = 130/172 (76%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 21125 AGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCCA 21184 ||||||||||| || | ||| |||||||||||| | |||||| |||||| | | ||||| Sbjct 101808304 AGCATTTGGGGACCAACCTGTGATGGCTTAGATCGGATTGTTGAGCGGTTTAATATGCCA 101808245 Query 21185 GAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAGC 21244 ||||| ||||| || |||||| || | |||||||||||||| || || | || |||| Sbjct 101808244 GAGCTGCAAGTTGGTGACTGGATCCTCTTTGAAAACATGGGTGCCTATA-CTGTTGCAGC 101808186 Query 21245 -TCTTCAACCTTTAACGGCTTCCCAAAGCCAGAAAAGCACTATGTTATTTCA 21295 | || || || || || |||| | |||| || |||||||| || ||| Sbjct 101808185 AGCCTCTACTTTCAATGGATTCCAGAGGCCAACAATACACTATGTGATGTCA 101808134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 463421439311040