Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq43147 95.1 8e-15 >seq43147 Length=81232 Score = 95.1 bits (104), Expect = 8e-15 Identities = 110/148 (74%), Gaps = 8/148 (5%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 |||||||||||||| |||||||| ||||| |||||||| ||||| | || || || ||| Sbjct 80956 TATTCTGCTCCAAAGTGCCTCCACTGGAAACCATAAACTGGTCCCAAATCCCCCTCCTCT 81015 Query 97462 CTATCACAGAAACCAAGCTTATCTAAATAGGACCT----AGATCCATTTGCATCCCAAAT 97517 || | |||||| ||||||| |||| || |||||||| ||||||||||| Sbjct 81016 CTGGTGCTGAAACCCTGCTTATC----CAGGAACTCACGTGATCCATTAGCATCCCAAAT 81071 Query 97518 GTGCACACCAGATGCTGCAAGCTCTTTG 97545 | ||| || ||| | ||||||||| Sbjct 81072 CTTCACGCCCTTTGCAGAGAGCTCTTTG 81099 Score = 84.2 bits (92), Expect = 2e-11 Identities = 131/185 (71%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176 ||||||||||| ||||| | || | || |||||||| ||||| || |||||||| ||| Sbjct 77640 GTGACATGGGCAATCATGTATGTGAGCAGTGAATAGCTGGCAATATTGAAAGGCACTCCT 77699 Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236 |||||||| || | || || ||||| | || || || | | |||| ||||| Sbjct 77700 AGTCCCATGTCTCCAGACCTCTGATAGAGTTGGCAAGACAATTCACCATTTAGAACATAG 77759 Query 97237 AACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAA 97296 ||||| | | |||| || || ||||| ||||| | || ||||| || ||| | | Sbjct 77760 AACTGGCAAAGGGCATGGCATGGAGGCAAAGCCATCAGAGAAATATCTAGGA-ATTGC-A 77817 Query 97297 GCACA 97301 ||||| Sbjct 77818 GCACA 77822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346541449408730