Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq33965 134 1e-26 >seq33965 Length=3108 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | |||| ||||||||||| ||| |||||||| || | ||| || ||| | Sbjct 669 CCACCTCTGAGACGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 610 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| |||||||| || || ||||||| | || |||||||| || ||| Sbjct 609 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 550 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || || ||||||||| | | |||||| | | || || Sbjct 549 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 490 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 489 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCATGC 441 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| ||||||||||| ||| |||||||| || | ||| || ||| | Sbjct 897 CCACCCCTCAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 838 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| ||||| || || || ||||||| | || |||||||| || ||| Sbjct 837 AGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 778 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || || ||||||||| | | |||||| | | || || Sbjct 777 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 718 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 717 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCATGC 669 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| ||| | |||| || |||||||| || | ||| || ||| | Sbjct 441 CCACCCCTCAGGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 382 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| ||||| || || || ||||||| | || |||||||| || ||| Sbjct 381 AGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 322 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||| ||||| | || || ||||| || | | |||||| | | || || Sbjct 321 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCAACC 262 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||||| || || || || || ||||||||||||||||| Sbjct 261 TCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447969612704040