Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq38108 114 2e-21 seq47211 96.9 5e-16 >seq38108 Length=7909 Score = 114 bits (126), Expect = 2e-21 Identities = 171/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| || || || |||||||| || ||||||||||| || || Sbjct 1814 CGCCAAGCGCCACCGCAAGGTGCTGCGCGACAACATCCAGGGCATCACCAAGCCGGCCAT 1755 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || |||||||| || || || || ||||| |||| || || |||| || |||| Sbjct 1754 CCGCCGCCTGGCTCGGCGCGGCGGCGTGAAGCGCATCTCGGGGCTGATCTACGAGGAGAC 1695 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | || | ||| ||| |||| || || || ||| ||||| Sbjct 1694 GCGCGGCGTGCTGAAGGTGTTTTTGGAGAACGTGATCCGCGACGCCGTCACCTACACCGA 1635 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| || || ||||||| | ||||| || | || || || || Sbjct 1634 GCACGCCAAGAGGAAGACGGTGACGGCCATGGACGTGGTCTAGGCCCTCAAGCGCCAGGG 1575 Query 16672 CCG 16674 || Sbjct 1574 ACG 1572 >seq47211 Length=1576 Score = 96.9 bits (106), Expect = 5e-16 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 16469 CAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528 || || ||||||||||| || ||||| || |||||||| || || || || ||||| || Sbjct 173 CAGGGCATCACCAAGCCGGCCATCCGCCGCCTGGCTCGGCGCGGCGGCGTGAAGCGCATC 232 Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588 || || || |||| || |||| || | || ||||| | || | ||| ||| ||| Sbjct 233 TCGGGGCTGATCTACGAGGAGACGCGCGGCGTGCTGAAGGTGTTTTTGGAGAACGTGATC 292 Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648 | || || || ||| ||||||||||| || | ||||| || || ||||||| | Sbjct 293 CGCGACGCCGTCACCTACACCGAGCACGCCAAGAGGAAGACGGTGACGGCCATGGACGTG 352 Query 16649 GTCTATGCATTGAAACGTCAAGGCCG 16674 ||||| || | || || || || || Sbjct 353 GTCTACGCCCTCAAGCGCCAGGGACG 378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79022728835577