Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq33965 91.5 1e-13 seq29343 82.4 7e-11 >seq33965 Length=3108 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | ||||| || || | || || || | || ||| | || || ||| || Sbjct 212 AAAATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAGCCC 271 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 | |||||||| || | || || ||||| ||||| |||||||| || |||||| Sbjct 272 AGTGACACCATTGAAAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGAT 331 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||||| ||||| | | ||||||||||| ||||||| | | | | ||| || Sbjct 332 CAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGCACCCTGTCCGACTAC 391 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || || ||||| || | ||| | ||| Sbjct 392 AACATCCAGAAGGAATCCACCCTGCATCTTGTG 424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| | || || ||| ||| Sbjct 671 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 730 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| ||| | ||||| ||||| ||||| |||||||| || |||||||| Sbjct 731 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 790 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| ||||| | | ||||||||||| ||||||| | | | | ||| || ||| Sbjct 791 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGCACCCTGTCCGACTACAAC 850 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || ||||| || | || || ||| Sbjct 851 ATCCAGAAGGAATCCACTCTGCACTTGGTG 880 >seq29343 Length=28090 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 104593 TATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATA 104652 ||||| ||||||||||| ||||| ||||| |||||||| |||||||| || || | ||| Sbjct 23891 TATTCACCTACTCGTTTCTCAAAGAAATTGGTCTTGCCTTCCAGAGAGATGTTTTCCATG 23950 Query 104653 AATTCGAAAGGATTC 104667 || || ||||||||| Sbjct 23951 AAGTCAAAAGGATTC 23965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429635290535295