Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq35780 96.9 7e-15 seq10457 87.8 3e-12 >seq35780 Length=25771 Score = 96.9 bits (106), Expect = 7e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 245008 CTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGCTCGTC 245067 || ||||||||| || || ||||||||||| ||| ||||| |||| | |||||| || Sbjct 16812 CTTCATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTC 16871 Query 245068 CGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCAT 245127 | |||||||||||| | | || | ||| ||||||| ||| | ||||| ||||||| Sbjct 16872 CTTTCCAGTGTTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGCTCCAG 16931 Query 245128 GTAGACAGCGAGGGCGCCGGG 245148 ||||| || | || ||||| Sbjct 16932 GTAGATGGCAAAAGCCCCGGG 16952 >seq10457 Length=264043 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || ||||| || | || ||| | || || || ||||||||||| ||||| |||| || Sbjct 10444 GGTGAGAGAGTGATTGCTTTTGCTGCAGTTGAAGGCATCTTCTTTTCGGGTTCCTTTGCT 10503 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTGTC-GATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || || ||||| ||| || ||| ||| |||||| ||||| || ||||| || ||||| Sbjct 10504 GCTATATTTTGGCTGAAGAAG-AGGGGTCTGATGCCTGGACTGACTTTCTCCAATGAACT 10562 Query 42815 CATCAGCAGGGACGAGG 42831 || ||||| || |||| Sbjct 10563 TATTAGCAGAGATGAGG 10579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 943661766470640