Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq22742 104 9e-17 seq40792 98.7 4e-15 seq7487 87.8 7e-12 >seq22742 Length=2510 Score = 104 bits (114), Expect = 9e-17 Identities = 238/353 (67%), Gaps = 9/353 (3%) Strand=Plus/Minus Query 451259 TCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACT 451318 || ||||| ||||| || ||||| || | ||| || ||| | || | | || | | Sbjct 1976 TCCATGGTCCTTACCAAGATGAAGGAGATAGCTGAGGCCTATCTGGGG-CGCAAGGTGCA 1918 Query 451319 GA-TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGA 451377 || ||| || || || || || ||||| |||||||| | || || || || |||||||| Sbjct 1917 GAATGCTGTCATCACAGTGCCTGCTTACTTCAATGACTCCCAGCGCCAGGCCACTAAAGA 1858 Query 451378 TGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGC 451437 ||| || || |||| | ||||| | || ||||| || || || ||||||||||| Sbjct 1857 TGCTGGCACCATCACTGGCCTTAATGTGATGCGTATTATCAACGAGCCCACAGCAGCTGC 1798 Query 451438 TCTAGCATATGGACTAGGAAAATCAAAAGAA-----ACAGAAGaaaaaaaTATTTTAGTA 451492 | | || ||||| || ||| || ||| | | | | ||| || ||| | | | Sbjct 1797 TATCGCCTATGG-CTTGGACAA-GAAAGGTACCCGGGCTGGAGAGAAGAATGTGCTCATC 1740 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 ||||| || || || || ||| |||| || | ||| | ||||| ||||| | ||| Sbjct 1739 TTTGACTTGGGAGGGGGCACTTTTGATGTGTCCATCCTTACCATTGAGGATGGCATCTTT 1680 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||| | || |||||| || ||||| || || || || |||| || Sbjct 1679 GAGGTGAAGTCCACAGCTGGTGACACCCATCTGGGTGGAGAGGACTTTGACAA 1627 Score = 84.2 bits (92), Expect = 9e-11 Identities = 113/156 (72%), Gaps = 6/156 (4%) Strand=Plus/Minus Query 451982 AAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA 452041 |||||| | || |||||||| |||||||| ||||| ||||| || ||||||||||| || Sbjct 1250 AAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGCGCTGCTGTGCAAGCAGCTATCCTC 1191 Query 452042 ACAGGTTCAGATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTA 452098 | || ||| | ||| || | ||| | ||| | | ||||| || ||||| Sbjct 1190 ATGGG---AGACAAGTCTGAGAATGTGCAGGATCTGCTGCTGCTGGATGTCACCCCTCTG 1134 Query 452099 TCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACT 452134 || || || | || |||||||||||| |||||||| Sbjct 1133 TCCCTGGGCATCGAGACAGCTGGTGGAGTGATGACT 1098 >seq40792 Length=30162 Score = 98.7 bits (108), Expect = 4e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| | || ||| | ||||| || || ||||||||||| | || || || || || Sbjct 1323 GTTACTAACGCTGTAGTGACTGTACCAGCCTATTTCAATGACTCTCAGCGTCAGGCTACA 1382 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 |||||||| ||| ||||| || | || || || |||||||| ||||| || ||||| Sbjct 1383 AAAGATGCTGGAACCATTGCAGGGCTCAACGTACTGCGAATTATCAATGAGCCAACAGCT 1442 Query 451433 GCTGCTCTAGCATATGGACTAG 451454 ||||| |||| ||||| |||| Sbjct 1443 GCTGCGATAGCCTATGGCCTAG 1464 >seq7487 Length=6645 Score = 87.8 bits (96), Expect = 7e-12 Identities = 84/107 (79%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 451190 AAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAA---ACTAAAACTTTTGCTCCT 451246 |||| |||||| |||||||||| || | ||||| | || ||||| ||||||||| Sbjct 317 AAAGCCAAGCCCCATATTCAAGTTGATGTTGGAGGTGGACAGACAAAAACATTTGCTCCT 376 Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGA 451293 ||||||||||| ||||||| || || || ||||| ||||| ||||| Sbjct 377 GAAGAAATTTCTGCTATGGTCCTGACAAAGATGAAGGAAACTGCAGA 423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1974265661052012