Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq33965 141 2e-28 seq2155 84.2 5e-11 >seq33965 Length=3108 Score = 141 bits (156), Expect = 2e-28 Identities = 167/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | || || | ||| |||||||| || || || || ||||| |||| || || Sbjct 664 TCTGAGACGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGT 605 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| |||||||| || || ||||| || | || || || || |||||||| Sbjct 604 GCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCC 545 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 ||| ||||| || || || ||||||||||||||||||||| ||| || || || Sbjct 544 TTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTC 488 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||||| || || ||||| | ||||| Sbjct 487 CAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 443 Score = 131 bits (144), Expect = 4e-25 Identities = 154/207 (74%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| |||||||| || || || || ||||| |||| || || | ||||||||| || || Sbjct 874 GTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGTTG 815 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || | || || || || ||||||||||| ||||| || || || Sbjct 814 CTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTT 755 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||||||||||||||||||||| ||| || || || ||||| | ||||| || Sbjct 754 GGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTCTTGCC 698 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || || ||||| | ||||| Sbjct 697 TGTCAGGGTCTTCACGAAGATCTGCAT 671 Score = 113 bits (124), Expect = 1e-19 Identities = 154/214 (72%), Gaps = 6/214 (3%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||| || || ||||| || || || || ||||| |||| || || | ||||||||| Sbjct 423 ACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 364 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 || ||||| || || ||||| || | || || || || ||||||||||| ||||| || Sbjct 363 AGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 304 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || ||| || || ||||||||||| ||| || || || | ||| | ||| Sbjct 303 ATCTTGGCCTTAACATTTTCAATGGTGTC---ACTGGGCTCAACCTCCAAGGTGATGGTC 247 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || ||||||| || || || || | ||||||| Sbjct 246 TTGCCTGTCAGGGTCTTCACAAAGATCTGCATTT 213 >seq2155 Length=14231 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 |||||||||||||||| || | || || | |||||||| ||||||||||| || || | Sbjct 13794 CTTTTTGAATATTGTAGTCAGACAGTGTGCGTCCATCTTCTAGCTGCTTACCAGCAAAAA 13853 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | ||||| || || || |||||||||||| Sbjct 13854 TCAGTCGCTGCTGATCAGGAGGAATGCCT 13882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1108665801993363