Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq33965 113 3e-20 >seq33965 Length=3108 Score = 113 bits (124), Expect = 3e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 || || ||||||| | || |||||||| | ||| ||| ||||| ||||| ||||| Sbjct 900 TTACCACCCCTCAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCG 841 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || ||| | || |||| ||||| || || || ||||| || || | ||||| || | Sbjct 840 GACAGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGG 781 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCA 34931 || | || |||||||| ||||| |||||| | || | |||| || |||| Sbjct 780 GGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCA 721 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| ||||| || || || || |||||||| ||||||||||| Sbjct 720 ACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 671 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| ||||| ||||| ||||| || ||| | || |||| ||| Sbjct 651 ACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCC 592 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || | ||||| || | || | || |||||||| Sbjct 591 AGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGG 532 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| |||||| | || | |||| || |||||| || | ||| ||||| || Sbjct 531 ATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTG 472 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 471 CCTGTCAGGGTCTTCACGAAGATCTGCAT 443 Score = 100 bits (110), Expect = 2e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||| ||||| ||||| || ||| | || |||| ||||| || || || ||||| Sbjct 406 TTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAA 347 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || | ||||| || | || | || |||||||| ||||| || || Sbjct 346 GATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATT 287 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | |||| || |||||| || | ||| ||||| || || || || |||||||| Sbjct 286 TTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCAC 227 Query 34970 AAAGATCTGCATATT 34984 |||||||||||| || Sbjct 226 AAAGATCTGCATTTT 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324406542028392