Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq33965 96.9 3e-15 seq35780 93.3 4e-14 >seq33965 Length=3108 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| | ||||| || || || | || ||||| || || |||||||| ||| Sbjct 670 GCCACCTCTGAGACGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 611 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || |||| | ||||| || || || |||||| ||||||| | ||||||||||| || Sbjct 610 CAGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGG 551 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 |||||||| ||||| || || || | | || | ||||| |||| || || Sbjct 550 AATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAAC 491 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | |||||||| |||| || || ||||| || ||||| Sbjct 490 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || | ||| | || ||||| || || |||||||| ||| || |||| | Sbjct 429 CGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 370 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| ||||| || |||||| ||||||| | ||||||||||| || |||||||| ||| Sbjct 369 TCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 310 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || || || | | ||| | ||||| |||| || || || | || | Sbjct 309 TCCTGGATCTTGGCCTTAACATTTTCAATGGTGTCACTGGGCTCAACCTCCAAGGTGATG 250 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||||||| |||| || || || || || ||||| Sbjct 249 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 215 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 137197 CGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAG 137256 |||| || || || | || ||||| || || |||||||| ||| || |||| | Sbjct 885 CGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCA 826 Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| ||||| || |||||| ||||||| | ||||||||||| || |||||||| ||| Sbjct 825 TCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTG 766 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || || || || | | || | ||||| |||| || || || | || | Sbjct 765 TCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 706 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||||||| |||| || || ||||| || ||||| Sbjct 705 GTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 671 >seq35780 Length=25771 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/123 (78%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 151334 ACTATTTCCGCACACAAATTGCTGCATTTTATCAATCCGCAATTACTT-TGATTGCTTTT 151392 |||||||| | ||||| |||||||| ||| || ||| ||| | || |||||||| || Sbjct 15476 ACTATTTCTGTACACAGATTGCTGCTTTTGATGG-TCCCCAAGTTCTGCTGATTGCTCTT 15534 Query 151393 GCGGTTGCAAGCGTCCTTGTATAACATGTACGGTGTGCCGGTTTCGGCTTGAATTTCTAT 151452 |||||||||| ||| ||||| | |||||||||||||||||| || | ||| ||| || Sbjct 15535 CCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCCGGTCTCTGTCTGAGATTCAAT 15594 Query 151453 AAT 151455 || Sbjct 15595 GAT 15597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488193536854800