Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq33965 98.7 7e-16 >seq33965 Length=3108 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| || | ||| | ||| || ||| || || || |||||||| ||||| Sbjct 441 CCACCCCTCAGGCGCAGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAC 382 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||| || || ||||| |||| | ||||||||| | || Sbjct 381 AGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 322 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || ||||| ||| |||||| || | || || Sbjct 321 ATGCCTTCCTTGTCCTGGATCTTGGCCTT-AACATTTTCAATGGTGTCACTGGGCTCAAC 263 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || ||||| | || || |||||||||||||| Sbjct 262 CTCCAAGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 215 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 33519 GTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATC 33578 || |||||| |||| || | |||||| || |||||| || || || |||||||| || Sbjct 901 GTTACCACCCCTCAGGCGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTC 842 Query 33579 GGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTG 33638 ||| || ||||| | || |||| ||| || || ||||| |||| | ||||||||| | Sbjct 841 GGACAGGGTGCGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGG 782 Query 33639 CGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATT 33697 || | ||||| ||||| || || || | | | ||| |||||| || | | Sbjct 781 GGGAATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGCT 723 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || || | ||||| || || ||||| | || || || ||||||||||| Sbjct 722 CAACCTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 671 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 |||||||| | ||| | |||||| || |||||| || || || |||||||| ||||| Sbjct 669 CCACCTCTGAGACGCAGCACCAAGTGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGAC 610 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | ||||||||| | || Sbjct 609 AGGGTGCGCCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGA 550 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || || | | | ||| |||||| || | || || Sbjct 549 ATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGTTCTCAATGGTGTCACTGGGCTCAAC 491 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || ||||| | || || || ||||||||||| Sbjct 490 CTCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328474095074880