Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq35780 87.8 2e-12 seq10457 86.0 8e-12 >seq35780 Length=25771 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || || ||||| | ||||||||||| | ||| || || || ||||| Sbjct 15454 CTCATCTTTGCTAGTATACTCCACTATTTCTGTACACAGATTGCTGCTTTTGATGGTCCC 15513 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 ||| |||| || || |||||| |||||| | || ||||| |||||||| || || || Sbjct 15514 CAAGTTCTGCTGATTGCTCTTCCGGTTGCAAGAGTCTTTGTACAGCATGTACGGTGTGCC 15573 Query 111385 CGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA 111417 ||||| ||||| |||| | ||||| | ||| Sbjct 15574 GGTCTCTGTCTGAGATTCAATGATAGCGTACCA 15606 >seq10457 Length=264043 Score = 86.0 bits (94), Expect = 8e-12 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||||| | |||||||||||| ||||| || || ||||| ||||||| ||||| Sbjct 10579 CCTCATCTCTGCTAATAAGTTCATTGGAGAAAGTCAGTCCAGGCATCAGACCCCTCTTCT 10520 Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 ||| |||| | ||||| ||| || || || || |||||||| || || || ||||| Sbjct 10519 TCAGCCAAAATATAGCAGCA-AAGGAACCCGAAAAGAAGATGCCTTCAACTGCAGCAAAA 10461 Query 122797 GCAA 122800 |||| Sbjct 10460 GCAA 10457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627581473394400