Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq33965 98.7 7e-16 >seq33965 Length=3108 Score = 98.7 bits (108), Expect = 7e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| || || || ||||| || || || || ||||| | || ||||| || Sbjct 212 AAAATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCTTGGAGGTTGAGCCC 271 Query 23668 ACGGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 | ||||| |||||| | |||| | || | | ||||| ||||| | || || || Sbjct 272 AGTGACACCATTGAAAATGTTAAGGCCAAGA-TCCAGGACAAGGAAGGCATTCCCCCCGA 330 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 ||| ||| | | || ||||| ||||| ||||||||||| | ||||| | ||| || Sbjct 331 TCAGCAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGCACCCTGTCCGACTA 390 Query 23787 CAACATACAAAAAGAGTCCAC 23807 |||||| || || || ||||| Sbjct 391 CAACATCCAGAAGGAATCCAC 411 Score = 95.1 bits (104), Expect = 8e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || ||||| || || ||||| ||| Sbjct 671 ATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 730 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| ||||| | || || ||||| Sbjct 731 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATTCCCCCCGATCAG 790 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| ||||| ||||||||||| | ||||| | ||| |||||| Sbjct 791 CAGAGGCTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGCACCCTGTCCGACTACAAC 850 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || || ||||| Sbjct 851 ATCCAGAAGGAATCCAC 867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337773186473612