Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fulmarus_20glacialis_20[refseq_20GCF_5F000690835.1_202014-05-13] 57,389 sequences; 1,141,395,646 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq33965 107 4e-18 >seq33965 Length=3108 Score = 107 bits (118), Expect = 4e-18 Identities = 152/211 (72%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || || ||||||||||| |||| | || | ||||||||| | Sbjct 649 CAAG-TGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCA 591 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| ||||||||||| || | | || |||||||| || || | Sbjct 590 GCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGA 531 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073 | || ||||| |||| | | |||| ||| ||| || || || || || || | Sbjct 530 TCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTCT 474 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || || ||||||||||||| |||||| Sbjct 473 TGCCTGTCAGGGTCTTCACGAAGATCTGCAT 443 Score = 107 bits (118), Expect = 4e-18 Identities = 152/211 (72%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || || || ||||||||||| |||| | || | ||||||||| | Sbjct 877 CAAG-TGCAGAGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCTTCCA 819 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| ||||||||||| || | | || |||||||| || || | Sbjct 818 GTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCCTGGA 759 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073 | || ||||| |||| | | |||| ||| ||| || || || || || || | Sbjct 758 TCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGTCT 702 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || || ||||||||||||| |||||| Sbjct 701 TGCCTGTCAGGGTCTTCACGAAGATCTGCAT 671 Score = 105 bits (116), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || |||||||| || || || || || ||||||||||| |||| | || | ||||||| Sbjct 426 AGCACAAGATGCAGGGTGGATTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 367 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| ||||||||||| || | | || |||||||| || Sbjct 366 TCCAGTTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCGGGGGGAATGCCTTCCTTGTCC 307 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| | || | | |||| ||| ||| || || | || || Sbjct 306 TGGATCTTGGCCTTAACATTTTCAATGGTGTC---ACTGGGCTCAACCTCCAAGGTGATG 250 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || |||||||| |||| ||||||||| Sbjct 249 GTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATTTT 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152972399532019