Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq51765 93.3 5e-14 >seq51765 Length=19914 Score = 93.3 bits (102), Expect = 5e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 || || |||| ||||| | ||| || || ||||| ||||||||||| || ||||| ||| Sbjct 11192 AGCCCTGTGACATGGGCAATCATATATGTGAGCAGTGAGTAGCTGGCAATATTGAAAGGC 11133 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || || || ||||| || || || | ||| || || ||||| || || || || Sbjct 11132 ACTCCTAGTCCCATATCTCCTGATCTCTGATAGAGTTGGCAAGACAGTTCGCCATTTAGA 11073 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||||||||||| ||| ||||| || |||| ||||| Sbjct 11072 ACATAGAACTGGCAAAGGGCATGGCACGGAGGCAAAGCCAT 11032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584407047067200