Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gallirallus_20okinawae_20[genbank_20GCA_5F002003005.1_202017-02-09] 768,680 sequences; 1,114,530,436 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq51765 118 8e-22 >seq51765 Length=19914 Score = 118 bits (130), Expect = 8e-22 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 20388 AGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAA 20447 |||| | || | |||||||||||||| || ||| || ||||| || || ||| || Sbjct 11019 AGATATTTCTCTGATGGCTTTGCCTCCGTGCCATGCCCTTTGCCAGTTCTATGTTCTAAA 11078 Query 20448 TAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 | ||| |||| || ||| | ||||| |||| | ||||||||||| || || ||||| Sbjct 11079 TGGCGAACTGTCTTGCCAACTCTATCAGAGATCAGGAGATATGGGACTAGGAGTGCCTTT 11138 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAAC 20567 ||||||||| || || | ||||| || ||||||||||| ||||| |||| |||| Sbjct 11139 CAATATTGCCAGCTACTCACTGCTCACATATATGATTGCCCATGTCACAGGGCTAAAGGT 11198 Query 20568 GGGTGACTTAGTC 20580 ||| ||||| || Sbjct 11199 AGGTTACTTAATC 11211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395444329522600